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CsGy6G024450 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G024450
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionThreonine dehydratase
Genome locationGy14Chr6:24302325..24303276
RNA-Seq ExpressionCsGy6G024450
SyntenyCsGy6G024450
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0016053 - organic acid biosynthetic process (biological process)
GO:1901566 - organonitrogen compound biosynthetic process (biological process)
InterPro domainsIPR001721 - Threonine dehydratase, ACT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEQ28336.1 threonine deaminase [Lemna minor]9.84e-1135.78Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++AD   + EA  AT +PE+P + +R F  L+ P NI TEFKYRY   K + L      +    E      ++GF N    D 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          ++L   H
Subjt:  PASNLLLTH

KAE8647414.1 hypothetical protein Csa_004049, partial [Cucumis sativus]5.86e-46100Show/hide
Query:  MLFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFI
        MLFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFI
Subjt:  MLFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFI

XP_004143369.1 threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus]3.85e-1140.54Show/hide
Query:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA
        + A+T+G+N+NF+QL SI D AD+ NQTEAT AT LPEKP +L   FS L+   ++ TEFKYR+ + K  ++ +  G ++   E  E  KK+  +     
Subjt:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA

Query:  DDPASNLLLTH
        D   + L+  H
Subjt:  DDPASNLLLTH

XP_011624183.1 threonine dehydratase biosynthetic, chloroplastic isoform X3 [Amborella trichopoda]4.04e-0933.94Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++AD   + EA  AT +PEKP + +  F+ ++ P NI TEFKYRY   K   L      +    +     ++LG +N    D 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          ++L   H
Subjt:  PASNLLLTH

XP_020553615.1 threonine dehydratase biosynthetic, chloroplastic [Sesamum indicum]2.75e-0933.94Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        A+T+G+N+NF++L  + ++AD   + EA  AT LPE P + +R F  L+ P NI TEFKYRY + K + L      +    E H   K++  +     + 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          ++L+  H
Subjt:  PASNLLLTH

TrEMBL top hitse value%identityAlignment
A0A0A0KHC3 Threonine dehydratase1.87e-1140.54Show/hide
Query:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA
        + A+T+G+N+NF+QL SI D AD+ NQTEAT AT LPEKP +L   FS L+   ++ TEFKYR+ + K  ++ +  G ++   E  E  KK+  +     
Subjt:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA

Query:  DDPASNLLLTH
        D   + L+  H
Subjt:  DDPASNLLLTH

A0A1U7W8H0 Threonine dehydratase2.68e-0933.33Show/hide
Query:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA
        + AIT+G+N+NF++L  + ++AD   Q EA  AT + EKP + ++ FS ++ P NI TEFKYRY + K + L      +    E  E  +++ + N    
Subjt:  LFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVA

Query:  DDPASNLLLTH
        +   ++L+  H
Subjt:  DDPASNLLLTH

A0A7N0TBQ6 Threonine dehydratase1.42e-0933.94Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NFN+L  + ++AD   Q EA  AT +PE P + +R F+ ++ P NI TEFKYRY T +   L      +   +E     +++        + 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
         A++L+  H
Subjt:  PASNLLLTH

G5CNY2 Threonine dehydratase4.76e-1135.78Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++AD   + EA  AT +PE+P + +R F  L+ P NI TEFKYRY   K + L      +    E      ++GF N    D 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          ++L   H
Subjt:  PASNLLLTH

W1NDX3 Threonine dehydratase1.97e-0933.94Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++AD   + EA  AT +PEKP + +  F+ ++ P NI TEFKYRY   K   L      +    +     ++LG +N    D 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          ++L   H
Subjt:  PASNLLLTH

SwissProt top hitse value%identityAlignment
A0FKE6 Threonine dehydratase 1 biosynthetic, chloroplastic4.4e-0845.71Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLL
        AIT+G+N+NF++L  + ++AD   Q EA  AT +PE P + ++ F+ ++ P N ITEFKYRY + K R L
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLL

Q9AXU4 Threonine dehydratase2.9e-0748.39Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRY
        AI +G+N++F++L  +VD+AD   Q EA  AT +PE+P + ++ F  L+ P N ITEFKYRY
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRY

Q9ZSS6 Threonine dehydratase biosynthetic, chloroplastic9.8e-0833.03Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++A+   Q EA  AT +PEKP +  +QF  L+ P N I+EFKYR  + K  ++ +  G +    E     K++  +     + 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          S+L+  H
Subjt:  PASNLLLTH

Arabidopsis top hitse value%identityAlignment
AT3G10050.1 L-O-methylthreonine resistant 17.0e-0933.03Show/hide
Query:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD
        AIT+G+N+NF++L  + ++A+   Q EA  AT +PEKP +  +QF  L+ P N I+EFKYR  + K  ++ +  G +    E     K++  +     + 
Subjt:  AITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADD

Query:  PASNLLLTH
          S+L+  H
Subjt:  PASNLLLTH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTTGCAATAACAAATGGTTCAAATATCAATTTTAATCAACTTGATAGCATTGTTGATATTGCTGATGCTGCTAACCAAACTGAGGCTACTTCTGCAACCAAATT
GCCTGAGAAACCTGCAACCTTGAGACGACAATTTTCTCACTTGCTTCAACCTTGGAACATTATTACTGAATTTAAGTATAGATATATAACTCTGAAAGTGAGGTTGCTGT
GCTTTATAGATGGAAGAATCAGAAAAGGAGATGAGTTCCATGAAAGTGCTAAGAAGCTTGGTTTCAATAATAGTGCCGTAGCTGATGATCCAGCCTCCAACCTTCTTCTC
ACACACAATTGTTTAATTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTTGCAATAACAAATGGTTCAAATATCAATTTTAATCAACTTGATAGCATTGTTGATATTGCTGATGCTGCTAACCAAACTGAGGCTACTTCTGCAACCAAATT
GCCTGAGAAACCTGCAACCTTGAGACGACAATTTTCTCACTTGCTTCAACCTTGGAACATTATTACTGAATTTAAGTATAGATATATAACTCTGAAAGTGAGGTTGCTGT
GCTTTATAGATGGAAGAATCAGAAAAGGAGATGAGTTCCATGAAAGTGCTAAGAAGCTTGGTTTCAATAATAGTGCCGTAGCTGATGATCCAGCCTCCAACCTTCTTCTC
ACACACAATTGTTTAATTTGTTGA
Protein sequenceShow/hide protein sequence
MLFAITNGSNINFNQLDSIVDIADAANQTEATSATKLPEKPATLRRQFSHLLQPWNIITEFKYRYITLKVRLLCFIDGRIRKGDEFHESAKKLGFNNSAVADDPASNLLL
THNCLIC