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CsGy6G024495 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G024495
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBeta-galactosidase
Genome locationGy14Chr6:24334391..24334869
RNA-Seq ExpressionCsGy6G024495
SyntenyCsGy6G024495
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily
IPR031330 - Glycoside hydrolase 35, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025304.1 beta-galactosidase-like [Cucumis melo var. makuwa]1.32e-3082.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

KGN48220.1 hypothetical protein Csa_003787 [Cucumis sativus]3.35e-7198.04Show/hide
Query:  MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENY DIQITRVKKVCAKPYAGSTLELSCHD TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
Subjt:  MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

Query:  CH
        CH
Subjt:  CH

TYK07364.1 beta-galactosidase-like [Cucumis melo var. makuwa]4.66e-3182.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

XP_016902878.1 PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase-like [Cucumis melo]6.80e-3082.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

XP_038882297.1 beta-galactosidase 15-like [Benincasa hispida]1.19e-2880Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQ TRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNPRG CDNFQKGTCDSSTA 
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

TrEMBL top hitse value%identityAlignment
A0A0A0KET4 Beta-galactosidase1.62e-7198.04Show/hide
Query:  MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENY DIQITRVKKVCAKPYAGSTLELSCHD TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
Subjt:  MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

Query:  CH
        CH
Subjt:  CH

A0A1S4E3S3 Beta-galactosidase3.29e-3082.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

A0A5A7SI46 Beta-galactosidase-like6.39e-3182.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

A0A5D3C7Z1 Beta-galactosidase-like2.26e-3182.86Show/hide
Query:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        LFE +      IDIQITRVKKVCAKPYAGSTLELSCHD TIK+I+FVSFGNP GNCDNFQKGTCDSSTAL
Subjt:  LFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

A0A6J1CRE5 Beta-galactosidase1.13e-2666.67Show/hide
Query:  YMYHGGTNFGRTSGLFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        Y+ + G N   T  LFE +      IDIQ TRV+KVCAKPY GSTLELSCHD TI DI FVSFGNPRG+C+NFQKG+CDSSTA 
Subjt:  YMYHGGTNFGRTSGLFENY------IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase2.3e-0872.97Show/hide
Query:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG
        RTAED+A  + RFFQ GG+ QNYYMYHGGTNFGR +G
Subjt:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG

P49676 Beta-galactosidase3.6e-0642.55Show/hide
Query:  KVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS
        +VCAK +  + +ELSC++  I  + F SFGNP G C +F  G+C+ +
Subjt:  KVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS

Q7G3T8 Beta-galactosidase 135.0e-0872.97Show/hide
Query:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG
        R+AED+  A+  FFQ  GS+QNYYMYHGGTNFGRTSG
Subjt:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG

Q9C6W4 Beta-galactosidase 154.5e-0940.48Show/hide
Query:  YHGGTNFGRTSG-----LFE------NYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS
        YH   +F  + G     LFE      + ++ Q   V  VCA  Y  + LELSC+   I  I F SFGNP G+C +F+KGTC++S
Subjt:  YHGGTNFGRTSG-----LFE------NYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS

Q9C6W4 Beta-galactosidase 154.3e-0770.27Show/hide
Query:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG
        RT EDV  A+ RFFQ  G+ QNYYMYHGGTNF RT+G
Subjt:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG

Q9FN08 Beta-galactosidase 105.0e-0875.68Show/hide
Query:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG
        R AEDVA  + RFF  GGS+ NYYMYHGGTNFGRTSG
Subjt:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG

Q9SCV5 Beta-galactosidase 72.3e-0872.97Show/hide
Query:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG
        RTAED+A  + RFFQ GG+ QNYYMYHGGTNFGR +G
Subjt:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 152.5e-1048.21Show/hide
Query:  IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS
        ++ Q   V  VCA  Y  + LELSC+   I  I F SFGNP G+C +F+KGTC++S
Subjt:  IDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSS

AT1G31740.1 beta-galactosidase 153.0e-0870.27Show/hide
Query:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG
        RT EDV  A+ RFFQ  G+ QNYYMYHGGTNF RT+G
Subjt:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG

AT2G32810.1 beta galactosidase 91.0e-0872.97Show/hide
Query:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG
        R AED+  A+ RF+Q GGS QNYYMY GGTNFGRTSG
Subjt:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG

AT2G32810.1 beta galactosidase 93.1e-0547.5Show/hide
Query:  LELSCHDG-TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        + L C DG  I  I+F S+G PRG+CD F  G C +S +L
Subjt:  LELSCHDG-TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

AT2G32810.2 beta galactosidase 91.0e-0872.97Show/hide
Query:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG
        R AED+  A+ RF+Q GGS QNYYMY GGTNFGRTSG
Subjt:  RTAEDV--AIGRFFQYGGSMQNYYMYHGGTNFGRTSG

AT2G32810.2 beta galactosidase 93.1e-0547.5Show/hide
Query:  LELSCHDG-TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL
        + L C DG  I  I+F S+G PRG+CD F  G C +S +L
Subjt:  LELSCHDG-TIKDIDFVSFGNPRGNCDNFQKGTCDSSTAL

AT5G20710.1 beta-galactosidase 71.6e-0972.97Show/hide
Query:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG
        RTAED+A  + RFFQ GG+ QNYYMYHGGTNFGR +G
Subjt:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG

AT5G63810.1 beta-galactosidase 103.6e-0975.68Show/hide
Query:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG
        R AEDVA  + RFF  GGS+ NYYMYHGGTNFGRTSG
Subjt:  RTAEDVA--IGRFFQYGGSMQNYYMYHGGTNFGRTSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACAGCTGAGGATGTAGCAATTGGTCGTTTCTTCCAATATGGTGGTTCCATGCAGAATTATTATATGTATCATGGTGGGACAAACTTTGGTAGAACTTCGGGATT
GTTTGAAAATTACATAGATATCCAGATAACAAGAGTGAAAAAAGTGTGTGCAAAGCCTTATGCAGGAAGCACATTGGAGCTATCATGCCATGATGGAACCATCAAAGACA
TCGATTTTGTGAGCTTTGGGAATCCTCGTGGCAATTGTGACAATTTCCAGAAGGGTACCTGTGATTCTTCCACTGCCCTCTGTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACAGCTGAGGATGTAGCAATTGGTCGTTTCTTCCAATATGGTGGTTCCATGCAGAATTATTATATGTATCATGGTGGGACAAACTTTGGTAGAACTTCGGGATT
GTTTGAAAATTACATAGATATCCAGATAACAAGAGTGAAAAAAGTGTGTGCAAAGCCTTATGCAGGAAGCACATTGGAGCTATCATGCCATGATGGAACCATCAAAGACA
TCGATTTTGTGAGCTTTGGGAATCCTCGTGGCAATTGTGACAATTTCCAGAAGGGTACCTGTGATTCTTCCACTGCCCTCTGTCATTGA
Protein sequenceShow/hide protein sequence
MRTAEDVAIGRFFQYGGSMQNYYMYHGGTNFGRTSGLFENYIDIQITRVKKVCAKPYAGSTLELSCHDGTIKDIDFVSFGNPRGNCDNFQKGTCDSSTALCH