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CsGy6G024760 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G024760
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S acidic ribosomal protein P2-like
Genome locationGy14Chr6:24561355..24562331
RNA-Seq ExpressionCsGy6G024760
SyntenyCsGy6G024760
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604363.1 hypothetical protein SDJN03_04972, partial [Cucurbita argyrosperma subsp. sororia]5.69e-4675Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E +DERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPV EDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        EVEE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

XP_004143310.2 60S acidic ribosomal protein P2 [Cucumis sativus]4.67e-6698.28Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVV AAEPVKEDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EV-EESDEDMCFSLFD
        EV EESDEDMCFSLFD
Subjt:  EV-EESDEDMCFSLFD

XP_022925971.1 60S acidic ribosomal protein P2-like [Cucurbita moschata]9.72e-4775.86Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPV EDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        EVEE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

XP_022977389.1 60S acidic ribosomal protein P2-like [Cucurbita maxima]1.38e-4676.72Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPVKEDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        EVEE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

XP_023543240.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]5.61e-4675Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKG+D+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPVKEDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        E EE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KKF6 Uncharacterized protein2.26e-6698.28Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVV AAEPVKEDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EV-EESDEDMCFSLFD
        EV EESDEDMCFSLFD
Subjt:  EV-EESDEDMCFSLFD

A0A6I9RDP9 60S acidic ribosomal protein P2A1.77e-4068.97Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-
        MK+VAAYLLA+LGGN +PS  D+K+IL SVG EAE+ERI+LLL+QVKGKD+ EL+A GREK A VPCGG    VAAGS  GGGAAAA   AAE  KE+K 
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-

Query:  KEVEESDEDMCFSLFD
        +E EESD+DM FSLFD
Subjt:  KEVEESDEDMCFSLFD

A0A6J1CQB9 60S acidic ribosomal protein P2A-like9.09e-4674.36Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVK-EDK
        MKIVAAYLLA+LGGN  PS+  IKAIL SVGVE ED+RIELLLSQVKG D+AE+VACGREKMA +PC G+AI V A + +GG A A   VAAEP K EDK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVK-EDK

Query:  KEV-EESDEDMCFSLFD
        KEV EESDEDMCFSLFD
Subjt:  KEV-EESDEDMCFSLFD

A0A6J1EDL3 60S acidic ribosomal protein P2-like4.70e-4775.86Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA+LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPV EDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        EVEE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

A0A6J1IM66 60S acidic ribosomal protein P2-like6.68e-4776.72Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MKIVAAYLLA LGGNTHPS+ DI AIL SVG+E EDERIELLLSQVKGKD+AE++A GREKMA +   GSAIPVAAG    GG AA+  VAAEPVKEDKK
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDED-MCFSLFD
        EVEE  ED MCFSLFD
Subjt:  EVEESDED-MCFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B3.9e-2555.17Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-
        MK++AAYLLA+LGGNT P+  D+K+IL SVG EA++E++E LL+++K KD+ E++A GRE+++ VP GG AI + A +   GG AA    A E  KE+K 
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-

Query:  KEVEESDEDMCFSLFD
        +E EESDEDM FSLFD
Subjt:  KEVEESDEDMCFSLFD

P41099 60S acidic ribosomal protein P23.8e-2861.21Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGS-AIPVAAGSDSGGGAAAAVVVAAEPVKEDK
        MK++AA+LLA+LGGNT P+  D+K+ILASVG +A+D++IELLLSQVKGKD+ EL+A GRE++A VP GG  A+  AAG   GGG  A    A EP KE+K
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGS-AIPVAAGSDSGGGAAAAVVVAAEPVKEDK

Query:  KEVEESDEDMCFSLFD
         E EESDE++ FSLFD
Subjt:  KEVEESDEDMCFSLFD

P46252 60S acidic ribosomal protein P2A3.2e-2760.34Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-
        MK VAAYLLA+L GN  PS  D+ AIL SVG E ++E++ELLLSQ+ GKD+ EL+A GREK A VPCGG  + VAA + + GGAA     AAE  KE+K 
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDK-

Query:  KEVEESDEDMCFSLFD
        +E EESD+DM FSLFD
Subjt:  KEVEESDEDMCFSLFD

P51407 60S acidic ribosomal protein P2-13.9e-2555.65Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAA+LLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

Q9SLF7 60S acidic ribosomal protein P2-21.0e-2556.52Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family7.3e-2756.52Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

AT2G27710.2 60S acidic ribosomal protein family7.3e-2756.52Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

AT2G27710.3 60S acidic ribosomal protein family7.3e-2756.52Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAAYLLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

AT2G27720.1 60S acidic ribosomal protein family2.8e-2655.65Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+VAA+LLA+L G   P+  DIK IL SVG E ED +IELLL +VKGKD+AEL+A GREK+A VP GG      A + SGGG       A    +E K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD

AT3G44590.2 60S acidic ribosomal protein family2.3e-2555.65Show/hide
Query:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK
        MK+ AA+LLA+LGGN +PS  +IK I+ +VG + + E IELLL +V GKD+AEL+A GREK+A VP GG     AA S  GGGAAA     AE  +  K+
Subjt:  MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKK

Query:  EVEESDEDMCFSLFD
        E EESD+DM FSLF+
Subjt:  EVEESDEDMCFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTTGCGGCTTATTTGTTGGCTATTTTGGGCGGAAACACTCACCCTTCCATTCACGACATTAAAGCCATTCTCGCCTCTGTTGGAGTTGAGGCCGAAGATGA
AAGAATCGAGTTGCTTCTTTCACAAGTTAAGGGTAAAGATGTTGCAGAGCTTGTAGCTTGTGGGAGGGAGAAGATGGCATGTGTTCCATGTGGTGGTTCTGCCATTCCTG
TAGCTGCCGGCAGTGATAGTGGCGGTGGTGCTGCCGCCGCTGTTGTTGTTGCGGCCGAGCCTGTCAAAGAGGACAAGAAAGAAGTTGAAGAATCTGATGAAGATATGTGC
TTCAGTCTTTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
TCTTTCTTTTCCTTTTAAATATTTGCAGACATGAAGATCGTTGCGGCTTATTTGTTGGCTATTTTGGGCGGAAACACTCACCCTTCCATTCACGACATTAAAGCCATTCT
CGCCTCTGTTGGAGTTGAGGCCGAAGATGAAAGAATCGAGTTGCTTCTTTCACAAGTTAAGGGTAAAGATGTTGCAGAGCTTGTAGCTTGTGGGAGGGAGAAGATGGCAT
GTGTTCCATGTGGTGGTTCTGCCATTCCTGTAGCTGCCGGCAGTGATAGTGGCGGTGGTGCTGCCGCCGCTGTTGTTGTTGCGGCCGAGCCTGTCAAAGAGGACAAGAAA
GAAGTTGAAGAATCTGATGAAGATATGTGCTTCAGTCTTTTTGATTGACGAGATTTATTTATGTCCTTCACCTTTCAAAGTTTGATCAACTTTAGTTTAGATTCATTTTA
AATTGATATATATACCCTGCAACTTTGGGTTCTTATTTAGGTGAAATTTTTGTCATG
Protein sequenceShow/hide protein sequence
MKIVAAYLLAILGGNTHPSIHDIKAILASVGVEAEDERIELLLSQVKGKDVAELVACGREKMACVPCGGSAIPVAAGSDSGGGAAAAVVVAAEPVKEDKKEVEESDEDMC
FSLFD