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CsGy6G025880 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G025880
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationGy14Chr6:25436408..25437455
RNA-Seq ExpressionCsGy6G025880
SyntenyCsGy6G025880
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148659.1 photosystem I reaction center subunit N, chloroplastic [Cucumis sativus]5.04e-11599.42Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQ KVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_008441057.1 PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]1.69e-11397.66Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_022950888.1 photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata]1.33e-11094.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ AAPSVASPGVVGYKLPAIRAQQA+VPEAKNDGRR+ALLYLGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_023543117.1 photosystem I reaction center subunit N, chloroplastic-like [Cucurbita pepo subsp. pepo]2.21e-10994.15Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGA SADL+SK+ AAPSVASPGVVGYKLPAIRAQQA+VPEAKNDGRR+ALLYLGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]6.88e-11397.08Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A0A0KFM1 Uncharacterized protein2.44e-11599.42Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQ KVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A1S3B240 photosystem I reaction center subunit N, chloroplastic8.18e-11497.66Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N8.18e-11497.66Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQA+VPEAKN+GRRTALLYLGA+LFAAAAAASNSSANAGVIEDYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X13.07e-10993.57Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AAP VASPGV GYKLPAIRAQQA+VPEAKNDGRRTALLYLGA+LFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

A0A6J1GG47 photosystem I reaction center subunit N, chloroplastic-like6.45e-11194.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK
        MATMNSSVLACNYAISGAGSADL+SK+ AAPSVASPGVVGYKLPAIRAQQA+VPEAKNDGRR+ALLYLGA+LFAAAAAASNSSANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)2.6e-4182.61Show/hide
Query:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        +  SA A + ++YLEKSKANKELNDKKRLATSGANFARAYTVEFG+C+FP NFTGCQDLAKQKKVPFI+DDLE+ECEGK+K+KCGSNVFWKW
Subjt:  SNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic1.9e-4467.83Show/hide
Query:  AAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF
        A P  ASP           A++ +V  AK+  RR+ALL L A    AA AAS  SA A V ++YLEKSK NKELNDKKR ATSGANFARAYTV+FG+CKF
Subjt:  AAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKF

Query:  PENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        P NFTGCQDLAKQKKVPFITDDLE+ECEGK+K+KCGSNVFWKW
Subjt:  PENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic1.1e-5564.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+    S    G      +P I+AQ+    +   ++GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFI++D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic8.9e-2654.55Show/hide
Query:  AIRAQQAKVPEAK-----------NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT
        A+RAQ AKV  A+           +   R  LL LG  L AAA A    +ANAGV+ED L KS ANK LN+KKRLATS AN AR+ TV  GTC+FPENF 
Subjt:  AIRAQQAKVPEAK-----------NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT

Query:  GCQDLAKQKKVPFITDDLELECEGKDKYKCGS
        GC++LA  K V +I +DL++ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFITDDLELECEGKDKYKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)7.7e-5764.74Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+    S    G      +P I+AQ+    +   ++GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFI++D+ LECEGKDKYKCGSNVFWKW
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)2.1e-3860.42Show/hide
Query:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA
        MA MNSSVL C+YAI+G+GS +LN K+    S    G      +P I+AQ+    +   ++GRR+A+++L A+LF+ AA   ++SANAGVI++YLE+SK 
Subjt:  MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYK-LPAIRAQQAKVPEAK-NDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKA

Query:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK
        NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQK
Subjt:  NKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTATGCCATTTCCGGCGCTGGATCGGCTGACCTCAACTCTAAACTCACCGCCGCCCCTTCTGTTGCGTCTCCTGG
GGTTGTGGGTTACAAGTTGCCGGCTATTAGAGCTCAACAGGCTAAGGTTCCTGAAGCTAAGAACGATGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCTCCCTCTTTG
CTGCGGCTGCGGCTGCCTCTAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTATCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACA
AGTGGAGCAAACTTCGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCCAAACAAAAGAAAGTTCCATTTAT
AACTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTATGCCATTTCCGGCGCTGGATCGGCTGACCTCAACTCTAAACTCACCGCCGCCCCTTCTGTTGCGTCTCCTGG
GGTTGTGGGTTACAAGTTGCCGGCTATTAGAGCTCAACAGGCTAAGGTTCCTGAAGCTAAGAACGATGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCTCCCTCTTTG
CTGCGGCTGCGGCTGCCTCTAACTCCTCTGCTAATGCTGGAGTCATTGAAGATTATCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACA
AGTGGAGCAAACTTCGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCCAAACAAAAGAAAGTTCCATTTAT
AACTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQAKVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLAT
SGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW