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CsGy6G028060 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G028060
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGibberellin regulated protein
Genome locationGy14Chr6:27054280..27054712
RNA-Seq ExpressionCsGy6G028060
SyntenyCsGy6G028060
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647513.1 hypothetical protein Csa_002853 [Cucumis sativus]3.30e-52100Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

KAG6595002.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]4.20e-4688.75Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADSS TYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TYK12845.1 peamaclein-like [Cucumis melo var. makuwa]1.57e-5096.25Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742787.1 peamaclein-like isoform X1 [Cucumis sativus]1.38e-4783.16Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR---------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAP+               VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR---------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742788.1 peamaclein-like isoform X2 [Cucumis sativus]2.70e-4784.04Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRV--------------KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAP V              KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRV--------------KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein6.68e-4883.16Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR---------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLSLILSSFFLQYATADSSTTYAP+               VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR---------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like6.24e-4680.85Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRV--------------KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAP V              KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRV--------------KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5D3CMS1 Peamaclein-like7.62e-5196.25Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLS ILSSFFLQY TADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like9.58e-4173.4Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR--------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SL+LSSF LQ+A ADS  TYAP               VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR--------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like7.88e-4072.34Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR--------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+SLILSSF L +A ADSS TY P               VKDRC+KYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPR--------------VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 83.2e-1852.87Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVK-------DRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++SL+L+S F   ++ADSS      V+       + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVK-------DRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 77.2e-1878.26Show/hide
Query:  VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein4.7e-1775.56Show/hide
Query:  KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++RCLKYCG+CC++C CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  KDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 107.2e-1853.33Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSS---------TTYAPRVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S     +TADSS          + A R +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSS---------TTYAPRVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-15.3e-2155.68Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSS--------TTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   +TL+L++L+++   +Q   A SS              + DRCLKYCG+CC++CKCVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSS--------TTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein6.7e-1952.33Show/hide
Query:  VSVTLVLLSLILSSFFLQYATADSST---------TYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++SL+L+S F   ++ADSS          + A R  + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSLILSSFFLQYATADSST---------TYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein6.7e-1952.94Show/hide
Query:  VSVTLVLLSLILSSFFLQYATADSS--------TTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++SL+L+S F   ++ADSS         + A R  + CL+ C +CCQ+C CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSLILSSFFLQYATADSS--------TTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein5.1e-1978.26Show/hide
Query:  VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C+CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein2.3e-1952.87Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVK-------DRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++SL+L+S F   ++ADSS      V+       + CLKYC +CCQ+C CVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVK-------DRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein5.1e-1953.33Show/hide
Query:  MKSVSVTLVLLSLILSSFFLQYATADSS---------TTYAPRVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++SL+++S     +TADSS          + A R +DRCLKYC +CC++C  CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSLILSSFFLQYATADSS---------TTYAPRVKDRCLKYCGLCCQQCK-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGTTTCCGTCACTTTGGTTCTTCTTTCATTGATTCTGAGCTCATTCTTCCTCCAATATGCCACTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGA
CAGGTGTTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAAGTGTGTGCCCTCTGGAACCTATGGAAACAAATCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTGTTTCCGTCACTTTGGTTCTTCTTTCATTGATTCTGAGCTCATTCTTCCTCCAATATGCCACTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGA
CAGGTGTTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAAGTGTGTGCCCTCTGGAACCTATGGAAACAAATCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MKSVSVTLVLLSLILSSFFLQYATADSSTTYAPRVKDRCLKYCGLCCQQCKCVPSGTYGNKSECPCYRDKLNSKGKSKCP