; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy6G028390 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy6G028390
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L26
Genome locationGy14Chr6:27304923..27305731
RNA-Seq ExpressionCsGy6G028390
SyntenyCsGy6G028390
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141862.1 60S ribosomal protein L26-1 [Cucumis sativus]1.41e-93100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]7.83e-9196.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]9.52e-9297.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]2.73e-9197.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_038880918.1 60S ribosomal protein L26-1 [Benincasa hispida]2.34e-9297.95Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMSAPLS+DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A0A0KGI0 KOW domain-containing protein6.82e-94100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A1S3B106 60S ribosomal protein L26-16.82e-94100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A5D3CR35 Ribosomal protein L26/L24P, eukaryotic/archaeal6.82e-94100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1GH60 60S ribosomal protein L26-14.61e-9297.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1INB1 60S ribosomal protein L26-14.61e-9297.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L262.1e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-12.3e-6788.36Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L264.8e-4467.61Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L261.5e-6182.07Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR++RK HF+A SS RRV MS+PLSTDLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-25.4e-6483.56Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein1.7e-6888.36Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein3.8e-6583.56Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCGAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCTCCGTCCAGCGTTCGTCGGGTTATCATGAGTGCTCCTCTCTCG
ACTGACCTCCGGTCAAAGTACAACGTCCGATCTATGCCGATTCGGAAGGATGACGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGTGAGGGCAAGGTAGTG
CAGGTGTATCGTAGGAAGTGGATTATCCACATCGAGCGCATCACTCGGGAAAAGGTTAACGGTTCCACTGTCAACGTCGGCATCAAACCCTCGAAGGTCGTGATT
ACGAAGCTCAGGTTGGACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGCGCCGCCGCCGACAAGGATAAGGGTACCAAGTTCACCGCCGAGGAT
ATCATGCAGAGCGTCGATTAA
mRNA sequenceShow/hide mRNA sequence
CCCGGGCTTCCTATCCCCTTTCCCTTTCCCCCCCTTCCCCATTCCCATTTTCGCCGGCCGCCATGAAGTACAATCCGAGGGTTTCCAGTTCCCGCCGCAAGAGCC
GCAAGGCTCATTTTTCGGCTCCGTCCAGCGTTCGTCGGGTTATCATGAGTGCTCCTCTCTCGACTGACCTCCGGTCAAAGTACAACGTCCGATCTATGCCGATTC
GGAAGGATGACGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGTGAGGGCAAGGTAGTGCAGGTGTATCGTAGGAAGTGGATTATCCACATCGAGCGCATCA
CTCGGGAAAAGGTTAACGGTTCCACTGTCAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGTTGGACAAGGACCGTAAGTCACTTCTGGATC
GTAAAGGCAAGGGCCGCGCCGCCGCCGACAAGGATAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAATTTTGAAAATGGTGATGTTTAA
TTTGATAGAACTGTTATTTTCTTTCATAGTTATCTATTGTGTTTTGTGTTCTTAAGATACTAGGAAAATTTTCCTCGGACATGTGGCTATAATTGTCGACTCTAG
AGGCCTTAATTTTTATGGTATTTTTAAATCACATTTTGTTATTCCAATGAGAGCTACTCTTGATGTTTGATTCATAATGTTGCTTGCTACCTCTCTTTACATTTG
CTTATTTGTAGTACATGATCTATGCAATCTGCTATGGATGACATCTATTAAGTTCTCATGGGGTTTGAACTGCT
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVI
TKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD