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CsGy7G001875 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G001875
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING/U-box superfamily protein
Genome locationGy14Chr7:1604500..1604694
RNA-Seq ExpressionCsGy7G001875
SyntenyCsGy7G001875
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0031507 - heterochromatin assembly (biological process)
GO:0048587 - regulation of short-day photoperiodism, flowering (biological process)
GO:0070734 - histone H3-K27 methylation (biological process)
GO:0005677 - chromatin silencing complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031519 - PcG protein complex (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144954.1 uncharacterized protein LOC101214496 [Cucumis sativus]5.17e-4296.88Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
        MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW

XP_011659694.1 E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus]4.51e-43100Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
        MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]3.77e-3180.95Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS
        +E+LGDCSICLDELSCEKREV+RIPCGHVYHESCIFKWL+NHNSCPLCRKPL   +D+E+  S
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS

XP_016901482.1 PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo]2.87e-2383.33Show/hide
Query:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR
        EE GDCS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Subjt:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR

XP_038883574.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]1.42e-2782.14Show/hide
Query:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD
        EELGDC ICL+ELSCEKREV+RIPCGHVYHESC+FKWL  +NSCPLCRKPL  +DD
Subjt:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDD

TrEMBL top hitse value%identityAlignment
A0A0A0K2W2 RING-type domain-containing protein2.50e-4296.88Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
        MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW

A0A0A0K696 RING-type domain-containing protein2.18e-43100Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
        MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW

A0A0A0KYC0 RING-type domain-containing protein1.36e-2581.48Show/hide
Query:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLH
        EE GDCS+CLDEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH
Subjt:  EELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLH

A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like1.83e-3180.95Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS
        +E+LGDCSICLDELSCEKREV+RIPCGHVYHESCIFKWL+NHNSCPLCRKPL   +D+E+  S
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein1.83e-3180.95Show/hide
Query:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS
        +E+LGDCSICLDELSCEKREV+RIPCGHVYHESCIFKWL+NHNSCPLCRKPL   +D+E+  S
Subjt:  MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING11.8e-1146.55Show/hide
Query:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEE
        E   C++C+D+   E  E  ++PC H+YH+ C+  WLE HNSCP+CR  L  DD D E
Subjt:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEE

Q6AXU4 E3 ubiquitin-protein ligase RNF1815.8e-1048.21Show/hide
Query:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEY
        C +CL E   E+  V+ +PC H++H +CI  WL   NSCPLCR  L  DDD  EE+
Subjt:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEY

Q8LPN7 E3 ubiquitin-protein ligase RING1-like8.1e-1245.9Show/hide
Query:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS
        E+  C++C+DE   +  +V ++PC HV+H+ C+  WLE HNSCP+CR  L  DD D E  S
Subjt:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS

Q9VHI7 E3 ubiquitin-protein ligase Iruka2.0e-1045.45Show/hide
Query:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEE
        CSIC D+   ++  V ++PC H+YHE+CI  WL  H++CP+CRK L  D +D ++
Subjt:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEE

Q9Y7K6 Uncharacterized RING finger protein C2A9.04c4.4e-1044Show/hide
Query:  CSICLDELS-CEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD
        C IC D+++  ++++  ++PCGH++ ++C+ KWLENH +CPLCRK + H+
Subjt:  CSICLDELS-CEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD

Arabidopsis top hitse value%identityAlignment
AT1G57730.1 RING/U-box superfamily protein1.4e-1145.61Show/hide
Query:  CSICLDELSCEKREVMRIP-CGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEY
        C+ICL+++S +  +   +P C HV+H  CI+KWL + N CPLCR  L  +DDD+  Y
Subjt:  CSICLDELSCEKREVMRIP-CGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEY

AT3G19950.1 RING/U-box superfamily protein5.7e-1345.9Show/hide
Query:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS
        E+  C++C+DE   +  +V ++PC HV+H+ C+  WLE HNSCP+CR  L  DD D E  S
Subjt:  ELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYS

AT3G56580.1 RING/U-box superfamily protein9.1e-1152.17Show/hide
Query:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL
        C +C DE    K E  ++PC H+YH  CI  WL  HNSCP+CRK L
Subjt:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL

AT3G56580.2 RING/U-box superfamily protein9.1e-1152.17Show/hide
Query:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL
        C +C DE    K E  ++PC H+YH  CI  WL  HNSCP+CRK L
Subjt:  CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL

AT5G37200.1 RING/U-box superfamily protein1.3e-1246.77Show/hide
Query:  EELGDCSICLDELSCEKREVMRIP-CGHVYHESCIFKWLENHNSCPLCRK-PLHHDDDDEEE
        EE   CSIC+++ S    +++R+P C H++H+ C+F+WL   NSCPLCRK P   +D+DE+E
Subjt:  EELGDCSICLDELSCEKREVMRIP-CGHVYHESCIFKWLENHNSCPLCRK-PLHHDDDDEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATC
TTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATC
TTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA
Protein sequenceShow/hide protein sequence
MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW