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CsGy7G002093 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G002093
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRING-type domain-containing protein
Genome locationGy14Chr7:1747489..1749187
RNA-Seq ExpressionCsGy7G002093
SyntenyCsGy7G002093
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030121 - AP-1 adaptor complex (cellular component)
GO:0035615 - clathrin adaptor activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050549.1 AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa]3.98e-3988.89Show/hide
Query:  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV
        MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT   PCEVKLLVCRFEELQR VGSEEEICS+CLTEFTREHL+
Subjt:  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV

KAE8645705.1 hypothetical protein Csa_020389 [Cucumis sativus]2.86e-6799.1Show/hide
Query:  RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV
        RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV
Subjt:  RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSV

Query:  CLTEFTREHLV
        CLTEFTREHL+
Subjt:  CLTEFTREHLV

TKY50666.1 RING-H2 finger protein ATL18 [Spatholobus suberectus]5.18e-3048.89Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL----SGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEE----EICSVCLTEFTREHL
        MI + +CR  + + TIVF TC+ IP  QLK A+ SMF  L    S  T  M      P    L V R+E+L+    VG E+    EICS+CL E+  E  
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL----SGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEE----EICSVCLTEFTREHL

Query:  VSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        VS+L RC HVFHL CIE W+ RNQF+CPLCRSF+F
Subjt:  VSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

XP_022762435.1 RING-H2 finger protein ATL18-like [Durio zibethinus]1.98e-3044.2Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR
        MI +      +S A ++F TCVWIP  QLK A+  +   +     +  +CQ++        V L V RFE+L+ + GS         EE+CS+CL EF +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR

Query:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        E +VSQLH+C H+FH+ CIE WL R+QFTCPLCRSF+F
Subjt:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

XP_030539517.1 RING-H2 finger protein ATL18-like [Rhodamnia argentea]4.36e-3047.58Show/hide
Query:  RGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEE------ICSVCLTEFTREHLVSQLHRCSHVF
        +  +S A ++F TC+W+PL QL+ AIS +   +S   C+     S  C  +L V RF++LQ+  G EEE       CS+CL ++  E LVS+LHRC HVF
Subjt:  RGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEE------ICSVCLTEFTREHLVSQLHRCSHVF

Query:  HLECIESWLQRNQFTCPLCRSFIF
        HL+CIE WL+R+QFTCPLCR  +F
Subjt:  HLECIESWLQRNQFTCPLCRSFIF

TrEMBL top hitse value%identityAlignment
A0A0A0K513 RING-type domain-containing protein1.64e-108100Show/hide
Query:  MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG
        MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG
Subjt:  MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVG

Query:  SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL
        SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL
Subjt:  SEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL

A0A0B2QNV8 RING-H2 finger protein ATL182.15e-2948.76Show/hide
Query:  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLE
        C+  + + TIVF TC+ IPL +LK A++SMF + S  T  M      P    L V R+E+L+     G ++EICS+CL E+  E  VS+L RC HVFHL 
Subjt:  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLE

Query:  CIESWLQRNQFTCPLCRSFIF
        CI+ W+ RNQF+CPLCRSF+F
Subjt:  CIESWLQRNQFTCPLCRSFIF

A0A5D3D5G1 AP-1 complex subunit sigma-21.93e-3988.89Show/hide
Query:  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV
        MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT   PCEVKLLVCRFEELQR VGSEEEICS+CLTEFTREHL+
Subjt:  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV

A0A6P6AC29 RING-H2 finger protein ATL18-like9.57e-3144.2Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR
        MI +      +S A ++F TCVWIP  QLK A+  +   +     +  +CQ++        V L V RFE+L+ + GS         EE+CS+CL EF +
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTR

Query:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF
        E +VSQLH+C H+FH+ CIE WL R+QFTCPLCRSF+F
Subjt:  EHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIF

K7N2N2 RING-type domain-containing protein2.15e-2948.76Show/hide
Query:  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLE
        C+  + + TIVF TC+ IPL +LK A++SMF + S  T  M      P    L V R+E+L+     G ++EICS+CL E+  E  VS+L RC HVFHL 
Subjt:  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLE

Query:  CIESWLQRNQFTCPLCRSFIF
        CI+ W+ RNQF+CPLCRSF+F
Subjt:  CIESWLQRNQFTCPLCRSFIF

SwissProt top hitse value%identityAlignment
Q9FHG8 Putative RING-H2 finger protein ATL501.5e-0859.09Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR
        C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR

Q9FL07 RING-H2 finger protein ATL461.4e-0954Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP
        C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP

Q9SUS5 E3 ubiquitin-protein ligase RHA1B2.6e-0838.67Show/hide
Query:  TTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWL-QRNQFTCPLCRS
        T+A+L  E+ + V RF +L   +   E+ C+VCL++F  +  + QL +C HVFH  C++ W+   N+ TCP+CR+
Subjt:  TTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWL-QRNQFTCPLCRS

Q9SZL4 RING-H2 finger protein ATL181.1e-1438.58Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV
        MI M   R  +  A IVF TCV IPL +LK                    A       L+   F + ++    EE  C +CL EF  E  V+ L RC+H+
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV

Query:  FHLECIESWLQRNQFTCPLCRSFIFQP
        FH+ CIE WL R   TCPLCRSF+  P
Subjt:  FHLECIESWLQRNQFTCPLCRSFIFQP

Q9XF92 Brassinosteroid-responsive RING protein 11.1e-0943.75Show/hide
Query:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS
        L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCPLCR+
Subjt:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein1.7e-1032.11Show/hide
Query:  IPLSQLKAAISSMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQRAVGSEEE----ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQF
        + ++ LK  + S+F I++  T   +     P       ++ + +F+ L   +  EEE     C VCL  F  E  VS+L  C H FH  C+++W   N  
Subjt:  IPLSQLKAAISSMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQRAVGSEEE----ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQF

Query:  TCPLCRSFI
        TCPLCRS +
Subjt:  TCPLCRSFI

AT3G61460.1 brassinosteroid-responsive RING-H27.6e-1143.75Show/hide
Query:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS
        L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCPLCR+
Subjt:  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRS

AT4G38140.1 RING/U-box superfamily protein7.8e-1638.58Show/hide
Query:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV
        MI M   R  +  A IVF TCV IPL +LK                    A       L+   F + ++    EE  C +CL EF  E  V+ L RC+H+
Subjt:  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHV

Query:  FHLECIESWLQRNQFTCPLCRSFIFQP
        FH+ CIE WL R   TCPLCRSF+  P
Subjt:  FHLECIESWLQRNQFTCPLCRSFIFQP

AT5G40250.1 RING/U-box superfamily protein9.9e-1154Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP
        C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP

AT5G57750.1 RING/U-box superfamily protein1.1e-0959.09Show/hide
Query:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR
        C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Subjt:  CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGC
AGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGT
CGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATT
TGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGA
AACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGC
AGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGT
CGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATT
TGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGA
AACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGA
Protein sequenceShow/hide protein sequence
MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEI
CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL