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CsGy7G003705 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G003705
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionGeranylgeranyl transferase type-2 subunit beta
Genome locationGy14Chr7:2844747..2845295
RNA-Seq ExpressionCsGy7G003705
SyntenyCsGy7G003705
Gene Ontology termsGO:0018344 - protein geranylgeranylation (biological process)
GO:0005968 - Rab-protein geranylgeranyltransferase complex (cellular component)
GO:0004663 - Rab geranylgeranyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001330 - PFTB repeat
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR045089 - Prenyltransferase subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645752.1 hypothetical protein Csa_020534 [Cucumis sativus]4.67e-7498.25Show/hide
Query:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQ--DTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
        MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQ  DTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
Subjt:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQ--DTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR

Query:  IFLSKKIVSSKAID
        IFLSKKIVSSKAID
Subjt:  IFLSKKIVSSKAID

XP_022153059.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica charantia]8.32e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDR HWINKE+LI+FILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_022153066.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia]6.99e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDR HWINKE+LI+FILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_038887310.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Benincasa hispida]9.39e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMI R HWINKE+LIKFILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

XP_038887312.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X3 [Benincasa hispida]6.65e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMI R HWINKE+LIKFILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

TrEMBL top hitse value%identityAlignment
A0A0A0K5L9 Uncharacterized protein2.20e-76100Show/hide
Query:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIF
        MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIF
Subjt:  MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIF

Query:  LSKKIVSSKAID
        LSKKIVSSKAID
Subjt:  LSKKIVSSKAID

A0A2N9FHC9 Uncharacterized protein1.09e-4581.82Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSS+IMIDR HWI+KE+L++FILD QDTENGGIS R DDAVDVYHT FG+AGLSLLEYPG KAIDPAYALPVDVVNRIF  K
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

A0A6J1DHW7 Geranylgeranyl transferase type-2 subunit beta4.03e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDR HWINKE+LI+FILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

A0A6J1DJK5 Geranylgeranyl transferase type-2 subunit beta3.39e-4687.64Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK
        C+S WVLSSLIMIDR HWINKE+LI+FILD QDTENGGIS R DDAVDVYHT FGIAGLSLLEYPG KAIDPAYALPVDVVNRIFL KK
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKK

A0A7J6FCH4 Geranylgeranyl transferase type-2 subunit beta2.14e-4585.23Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDR HWINKE+L+KFILD QD ENGGIS R DDAVDVYHT FG+AGLSLLEYPG KAIDPAYALPVDVVNRIFL K
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

SwissProt top hitse value%identityAlignment
O93830 Geranylgeranyl transferase type-2 subunit beta4.1e-1952.94Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYP--GPKAIDPAYALPVDVVNR
        C+S WVLSSL ++ R +W++ + L  FIL  QD ENGG S R  +  DVYHTCF IAGLSL++Y   G K IDP Y +PV+V ++
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYP--GPKAIDPAYALPVDVVNR

P20133 Geranylgeranyl transferase type-2 subunit beta9.1e-1953.01Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR
        C+S WVLSSL +I R  WIN E+L +FIL  QD + GGIS R ++ VDV+HT FG+AGLSL+ Y     IDP Y +P  V ++
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNR

P46960 Geranylgeranyl transferase type-2 subunit beta1.8e-1945.35Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFL
        C+  W LS L +I +  WI++ +LI F+L +QD ++GG + R++DA DVYHTCF +AGLSLL++P  + +DP + LP++V  ++ L
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFL

Q84J75 Geranylgeranyl transferase type-2 subunit beta 11.0e-3372.83Show/hide
Query:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDR HWI+K +L+KFILD QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

Q9LHL5 Geranylgeranyl transferase type-2 subunit beta 21.2e-3171.59Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDR HWI K +L+KFILDSQD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

Arabidopsis top hitse value%identityAlignment
AT3G12070.1 RAB geranylgeranyl transferase beta subunit 28.7e-3371.59Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDR HWI K +L+KFILDSQD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT3G12070.2 RAB geranylgeranyl transferase beta subunit 28.7e-3371.59Show/hide
Query:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        C+S WVLSSLIMIDR HWI K +L+KFILDSQD +NGGIS R    VD++HT FG+AGLSLLEYPG K IDPAYALPV V+NRI  +K
Subjt:  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT5G12210.1 RAB geranylgeranyl transferase beta subunit 17.1e-3572.83Show/hide
Query:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDR HWI+K +L+KFILD QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK

AT5G12210.2 RAB geranylgeranyl transferase beta subunit 17.1e-3572.83Show/hide
Query:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK
        L   C+S WVLSSLIMIDR HWI+K +L+KFILD QD +NGGIS R +DAVD++HT FG+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Subjt:  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGGTCACTGGATTAAT
AAGGAAAGACTCATTAAATTCATCTTAGATTCTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGA
ATAGCTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATA
GTATCATCCAAAGCTATCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGGTCACTGGATTAAT
AAGGAAAGACTCATTAAATTCATCTTAGATTCTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGA
ATAGCTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATA
GTATCATCCAAAGCTATCGATTGA
Protein sequenceShow/hide protein sequence
MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKI
VSSKAID