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CsGy7G004090 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G004090
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionphotosystem II repair protein PSB27-H1, chloroplastic
Genome locationGy14Chr7:3060576..3061601
RNA-Seq ExpressionCsGy7G004090
SyntenyCsGy7G004090
Gene Ontology termsGO:0010206 - photosystem II repair (biological process)
GO:0010207 - photosystem II assembly (biological process)
GO:0071484 - cellular response to light intensity (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009543 - chloroplast thylakoid lumen (cellular component)
InterPro domainsIPR025585 - Photosystem II Pbs27
IPR038450 - Photosystem II Pbs27 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572353.1 Photosystem II repair protein PSB27-H1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.33e-9386.13Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTV----RRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAA
        MASPTLITP TSKSQ   IPLKPKS+I+AA TT T     RRREFLSLTASVLAPS+VLFP +PALA+SD+EYVKDT EVIGKVRTTITMD+NDPNVAAA
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTV----RRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAA

Query:  VADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        VA+LRESSN WVAKYRKEK+LLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEM TAEKALLRGR
Subjt:  VADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
XP_004136817.1 photosystem II repair protein PSB27-H1, chloroplastic [Cucumis sativus]1.39e-111100Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
XP_008455335.1 PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Cucumis melo]2.70e-10998.22Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRR+FLSL+ASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSN WVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
XP_022952622.1 photosystem II repair protein PSB27-H1, chloroplastic-like [Cucurbita moschata]3.03e-9387.21Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV
        MASPTLITP TSKSQ   IPLKPKS+ISAA TT T    RRREFLSLTASVLAPS+VLFP +PALA+SD+EYVKDT EVIGKVRTTITMD+NDPNVAAAV
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV

Query:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        A+LRESSN WVAKYRKEK+LLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEM TAEKALLRGR
Subjt:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
XP_038887363.1 photosystem II repair protein PSB27-H1, chloroplastic [Benincasa hispida]1.44e-10494.08Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQ+PFIPLKPKSTISAA T  TVRRR+FLSLTASVLAPS+VLFPQSPALA+SDDEYVKDT+EVIGKVR TITMDRNDPNVAAAVA+L
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
TrEMBL top hitse value%identityAlignment
A0A0A0K1S2 Uncharacterized protein6.75e-112100Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
A0A1S3C1X2 photosystem II repair protein PSB27-H1, chloroplastic1.31e-10998.22Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRR+FLSL+ASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSN WVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
A0A5A7SR30 Photosystem II repair protein PSB27-H11.31e-10998.22Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
        MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRR+FLSL+ASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADL

Query:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        RESSN WVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Subjt:  RESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
A0A6J1GKW7 photosystem II repair protein PSB27-H1, chloroplastic-like1.47e-9387.21Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV
        MASPTLITP TSKSQ   IPLKPKS+ISAA TT T    RRREFLSLTASVLAPS+VLFP +PALA+SD+EYVKDT EVIGKVRTTITMD+NDPNVAAAV
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV

Query:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        A+LRESSN WVAKYRKEK+LLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEM TAEKALLRGR
Subjt:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
A0A6J1HZH1 photosystem II repair protein PSB27-H1, chloroplastic-like1.47e-9387.21Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV
        MASPTLITP TSKSQ   IPLKPKS+ISAA TT T    RRREFLSLTASVLAPS+VLFP +PALA+SD+EYVKDT EVIGKVRTTITMD+NDPNVAAAV
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAV

Query:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        A+LRESSN WVAKYRKEK+LLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEM TAEKALLRGR
Subjt:  ADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
SwissProt top hitse value%identityAlignment
Q9LR64 Photosystem II repair protein PSB27-H1, chloroplastic1.2e-4659.77Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSL--TASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAA
        MAS +        +  P  P    S++S  +  P    + RR+FLSL  T+++L  S      +P  AA D+EY+KDT+ VI KVR+T++M + DPNVA 
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSL--TASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAA

Query:  AVADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        AVA+LRE+SN WVAKYRKEKALLG+ASFRD+YSALNAVSGHY+SFGPTAPIPAKRKARILEEM+TAEKAL RGR
Subjt:  AVADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
Q9ZVZ9 Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic1.7e-0527.55Show/hide
Query:  YVKDTNEVIGKVRTTITMDRNDPNVAAAVAD-LRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL
        Y+K   EV+  +R ++  +  D       AD  +ES   +++ +R +K + G  S+ ++ + + A++  Y   GP+AP+P + K  IL++++ AE+ L
Subjt:  YVKDTNEVIGKVRTTITMDRNDPNVAAAVAD-LRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL
Arabidopsis top hitse value%identityAlignment
AT1G03600.1 photosystem II family protein8.4e-4859.77Show/hide
Query:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSL--TASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAA
        MAS +        +  P  P    S++S  +  P    + RR+FLSL  T+++L  S      +P  AA D+EY+KDT+ VI KVR+T++M + DPNVA 
Subjt:  MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPT---VRRREFLSL--TASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAA

Query:  AVADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
        AVA+LRE+SN WVAKYRKEKALLG+ASFRD+YSALNAVSGHY+SFGPTAPIPAKRKARILEEM+TAEKAL RGR
Subjt:  AVADLRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR
AT1G05385.1 photosystem II 11 kDa protein-related1.2e-0627.55Show/hide
Query:  YVKDTNEVIGKVRTTITMDRNDPNVAAAVAD-LRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL
        Y+K   EV+  +R ++  +  D       AD  +ES   +++ +R +K + G  S+ ++ + + A++  Y   GP+AP+P + K  IL++++ AE+ L
Subjt:  YVKDTNEVIGKVRTTITMDRNDPNVAAAVAD-LRESSNFWVAKYRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCCCAACACTCATAACCCCTTGTACTTCCAAATCTCAGAGCCCTTTCATACCTCTCAAACCCAAATCCACCATTTCCGCTGCCGTAACAACCCCCACCGTCCG
CCGCCGCGAGTTCCTTTCTTTGACCGCCTCTGTTCTAGCGCCGTCGTTCGTTCTGTTCCCTCAATCTCCGGCACTGGCGGCTTCGGACGACGAGTACGTGAAGGATACCA
ATGAGGTGATTGGTAAGGTGAGAACGACGATCACAATGGACAGAAATGACCCGAATGTGGCAGCAGCGGTGGCGGATCTTCGAGAAAGTTCGAATTTTTGGGTGGCTAAG
TATAGGAAGGAGAAAGCTCTATTGGGAAGAGCTTCGTTTAGGGATATGTATTCGGCATTGAACGCTGTGTCGGGGCATTATATTAGCTTCGGACCGACTGCGCCGATACC
GGCAAAGAGGAAGGCAAGGATTTTGGAAGAGATGGACACTGCGGAGAAAGCTCTATTAAGAGGGAGATGA
mRNA sequenceShow/hide mRNA sequence
GCTTAGCATTGGGCCTAATGAATATGGGCTTCTTAACTTATATAGTTTTTGAGTCCATTATTCTCCCAAATGAACAAGAAAGTGAAGATCTAAACCTTATATCTCATTGG
TCCATCCCTCATCCATAAGTCCAACAAATAAGATAAGACGATAAGCACACGTGGCAATCACCCAATTCCTCCAAATTTTTTTCTAACTAAACAATCCATCTTCACATTTC
ATTTCCCCTTCTCCTCTTCCAAAACTCCAATTTCCCCAAAATCATGGCCTCCCCAACACTCATAACCCCTTGTACTTCCAAATCTCAGAGCCCTTTCATACCTCTCAAAC
CCAAATCCACCATTTCCGCTGCCGTAACAACCCCCACCGTCCGCCGCCGCGAGTTCCTTTCTTTGACCGCCTCTGTTCTAGCGCCGTCGTTCGTTCTGTTCCCTCAATCT
CCGGCACTGGCGGCTTCGGACGACGAGTACGTGAAGGATACCAATGAGGTGATTGGTAAGGTGAGAACGACGATCACAATGGACAGAAATGACCCGAATGTGGCAGCAGC
GGTGGCGGATCTTCGAGAAAGTTCGAATTTTTGGGTGGCTAAGTATAGGAAGGAGAAAGCTCTATTGGGAAGAGCTTCGTTTAGGGATATGTATTCGGCATTGAACGCTG
TGTCGGGGCATTATATTAGCTTCGGACCGACTGCGCCGATACCGGCAAAGAGGAAGGCAAGGATTTTGGAAGAGATGGACACTGCGGAGAAAGCTCTATTAAGAGGGAGA
TGAAAATTTATGTGAGGCTTTTTCATTCTTTTGCTCTTTGTATTTTTATTTAATTTTTTCTTCCCAAGTATTGGAGTTTAACGTTTATGGGTTATGTAAGTATAGAATTT
GGGGATTCACAATTTGTGAATTTACAAGAGGAAAATATTCTAAATTTATCTAAGATTAATAGAGACCGGACTTTATATCTTGATTAGTTGGATGGATTTAGTAAATTATG
CATGAGATAATAATGTTACATGTTTTAGTTCATAAC
Protein sequenceShow/hide protein sequence
MASPTLITPCTSKSQSPFIPLKPKSTISAAVTTPTVRRREFLSLTASVLAPSFVLFPQSPALAASDDEYVKDTNEVIGKVRTTITMDRNDPNVAAAVADLRESSNFWVAK
YRKEKALLGRASFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKALLRGR