; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy7G004680 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G004680
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationGy14Chr7:3504467..3505045
RNA-Seq ExpressionCsGy7G004680
SyntenyCsGy7G004680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]1.04e-7173.44Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
        +GW        LV     + GSRA EGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN GGGGG YGWGWG GGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG

Query:  -WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
         WGWGGGGGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  -WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]3.29e-7074.05Show/hide
Query:  VILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG------WGWGGG
        +     + GSRA EGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN GGGGG YGWGWG GGGGGGGGGGGGGGGGG      WGWGGG
Subjt:  VILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG------WGWGGG

Query:  GGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
        GGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  GGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]3.69e-11090.31Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGG-YGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQNGGGGGGG YGWGWGSGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGG-YGWGWGSGGGGGGGGGGGGGGGG

Query:  G---WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        G   WGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  G---WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]5.27e-125100Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
Subjt:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]1.75e-7070.41Show/hide
Query:  MGWENPIKLSALVILATV------ISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGG
        +G +N  ++ A+  +  V      + GSRA EGL NG      TFLTFSELP  NAGE RNSS N+TTVEVSKQN GGGGG YGWGWG GGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------ISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGG

Query:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
        GGGGGGWGWGGGGGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein2.55e-125100Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
Subjt:  WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

A0A1S3C029 keratin, type II cytoskeletal 11.79e-11090.31Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGG-YGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQNGGGGGGG YGWGWGSGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGG-YGWGWGSGGGGGGGGGGGGGGGG

Query:  G---WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP
        G   WGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  G---WGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP

A0A2G9I2B9 Uncharacterized protein1.27e-4164.24Show/hide
Query:  ELPQRNAGERRNSSSNSTT---VEVS-KQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGK
        E PQ N      ++ N TT   V V+ K++GGGGGGGYGWGWG GGGGGGGGGGGGGGGGGWGWGGGGGG+W WGC    + ++ GRR  +   +N    
Subjt:  ELPQRNAGERRNSSSNSTT---VEVS-KQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGK

Query:  RMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
             ++Y MGEFAQCMV+GRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  RMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR

A0A540M1B0 Uncharacterized protein9.46e-4149.78Show/hide
Query:  MGWENPIKLSALVILATVISGSRAAEG-LGNGSMPMN--------VTFLTFSELPQRNAGERRNSSSNSTT-VEVSKQN---------------------
        MG     KL  L+ + T I GS AA G L NG+             + L  +E+P    GE RN +++ TT V+++ +                      
Subjt:  MGWENPIKLSALVILATVISGSRAAEG-LGNGSMPMN--------VTFLTFSELPQRNAGERRNSSSNSTT-VEVSKQN---------------------

Query:  -GGGGGGGYGWGWGSGGGGGGGGGG----GGGGGGGWGWGGGGGG--WWKWGCGGQPKSERVGRRDDNGGSRNVKG--KRMYSEKDYRMGEFAQCMVKGR
          GGGGGGY WGWG GGGGGGGGGG     GG GGGWGWGGGGGG  WWKWGCGG     + GR   N  S +V G  KR + E++Y +GEFAQCM KGR
Subjt:  -GGGGGGGYGWGWGSGGGGGGGGGG----GGGGGGGWGWGGGGGG--WWKWGCGGQPKSERVGRRDDNGGSRNVKG--KRMYSEKDYRMGEFAQCMVKGR

Query:  CRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR
        C+GMRLDCPLHCGGPCFYDC++MCKAHC RR
Subjt:  CRGMRLDCPLHCGGPCFYDCRYMCKAHCNRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like8.46e-7170.41Show/hide
Query:  MGWENPIKLSALVILATV------ISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGG
        +G +N  ++ A+  +  V      + GSRA EGL NG      TFLTFSELP  NAGE RNSS N+TTVEVSKQN GGGGG YGWGWG GGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------ISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGG

Query:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
        GGGGGGWGWGGGGGGWWKWGCGGQPKS R G     G  +NV  KR+Y+E+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGWGWGGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein1.1e-1950.34Show/hide
Query:  RNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW----GSGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRM
        +N     NS++    V   K++  GG G Y WGW    G GGGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG             GG    KGK  
Subjt:  RNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGW----GSGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKSERVGRRDDNGGSRNVKGKRM

Query:  YSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR
            ++   E+A+C  +G+C G RL+CP HCGG CFYDC ++CK HC R
Subjt:  YSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTCTGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATGAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGAGAGAGGAGAAACAGTTCTAGCAATAGTACTACAGTGGAGGTCAGCAAGCAAAACGGGGGAGGAGGCG
GCGGCGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGGATGGGGATGGGGTGGAGGTGGAGGTGGGTGG
TGGAAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACGACGCGACGATAACGGAGGAAGCAGAAATGTGAAGGGAAAGAGAATGTACAGCGAGAAAGATTA
TAGAATGGGAGAATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCATTGCGGCGGACCTTGCTTTTATGATTGTCGATACATGT
GTAAAGCTCACTGTAATCGACGCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTCTGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATGAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCAGGAGAGAGGAGAAACAGTTCTAGCAATAGTACTACAGTGGAGGTCAGCAAGCAAAACGGGGGAGGAGGCG
GCGGCGGCTATGGATGGGGATGGGGCAGCGGTGGTGGTGGAGGAGGAGGAGGAGGAGGTGGTGGTGGAGGTGGTGGAGGATGGGGATGGGGTGGAGGTGGAGGTGGGTGG
TGGAAATGGGGTTGTGGAGGACAGCCAAAATCCGAGAGAGTTGGACGACGCGACGATAACGGAGGAAGCAGAAATGTGAAGGGAAAGAGAATGTACAGCGAGAAAGATTA
TAGAATGGGAGAATTTGCGCAATGTATGGTGAAAGGAAGATGCAGAGGAATGAGATTAGATTGTCCACTCCATTGCGGCGGACCTTGCTTTTATGATTGTCGATACATGT
GTAAAGCTCACTGTAATCGACGCCCTTAG
Protein sequenceShow/hide protein sequence
MGWENPIKLSALVILATVISGSRAAEGLGNGSMPMNVTFLTFSELPQRNAGERRNSSSNSTTVEVSKQNGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGWGWGGGGGGW
WKWGCGGQPKSERVGRRDDNGGSRNVKGKRMYSEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCNRRP