; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy7G005498 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G005498
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr7:4040341..4040664
RNA-Seq ExpressionCsGy7G005498
SyntenyCsGy7G005498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659718.1 classical arabinogalactan protein 10 [Cucumis sativus]3.84e-59100Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
        MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV

Query:  SAAAFLF
        SAAAFLF
Subjt:  SAAAFLF
XP_022141985.1 classical arabinogalactan protein 1-like [Momordica charantia]1.48e-0549.11Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPH-NSPILSHKSVSSPS---------PSPSPSPV---ASSSLPPANALAPALLFNDAIT
        MAS+  T++AL AL LITS  AQSP    KK  H H+ SPSP  +SP +S KS  SP+         PS SPSP    +S S PPA+A  PA   N A +
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPH-NSPILSHKSVSSPS---------PSPSPSPV---ASSSLPPANALAPALLFNDAIT

Query:  NTFAVSASLFTA
        N+FAV+ SLF A
Subjt:  NTFAVSASLFTA
TrEMBL top hitse value%identityAlignment
A0A0A0K7F2 Uncharacterized protein1.86e-59100Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
        MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAV

Query:  SAAAFLF
        SAAAFLF
Subjt:  SAAAFLF
A0A6J1CJM5 classical arabinogalactan protein 1-like7.15e-0649.11Show/hide
Query:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPH-NSPILSHKSVSSPS---------PSPSPSPV---ASSSLPPANALAPALLFNDAIT
        MAS+  T++AL AL LITS  AQSP    KK  H H+ SPSP  +SP +S KS  SP+         PS SPSP    +S S PPA+A  PA   N A +
Subjt:  MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPH-NSPILSHKSVSSPS---------PSPSPSPV---ASSSLPPANALAPALLFNDAIT

Query:  NTFAVSASLFTA
        N+FAV+ SLF A
Subjt:  NTFAVSASLFTA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTCCCCATCACACTTATGGCACTAACGGCCCTATTCCTCATCACCTCCACCTTCGCTCAGTCTCCAGCCCCGTCGCCCAAGAAATCACACCACCCCCACTC
CCACTCTCCCTCTCCCCATAATTCCCCTATCCTTTCTCACAAATCGGTGTCTTCACCTTCGCCTTCACCGTCGCCTTCTCCGGTCGCTTCTTCCTCACTCCCTCCGGCCA
ATGCTCTTGCTCCTGCTCTTCTCTTTAATGATGCTATTACCAACACTTTCGCTGTCTCGGCTTCTCTCTTCACCGCCGTCTCCGCCGCTGCTTTCCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTCCCCATCACACTTATGGCACTAACGGCCCTATTCCTCATCACCTCCACCTTCGCTCAGTCTCCAGCCCCGTCGCCCAAGAAATCACACCACCCCCACTC
CCACTCTCCCTCTCCCCATAATTCCCCTATCCTTTCTCACAAATCGGTGTCTTCACCTTCGCCTTCACCGTCGCCTTCTCCGGTCGCTTCTTCCTCACTCCCTCCGGCCA
ATGCTCTTGCTCCTGCTCTTCTCTTTAATGATGCTATTACCAACACTTTCGCTGTCTCGGCTTCTCTCTTCACCGCCGTCTCCGCCGCTGCTTTCCTCTTCTAG
Protein sequenceShow/hide protein sequence
MASLPITLMALTALFLITSTFAQSPAPSPKKSHHPHSHSPSPHNSPILSHKSVSSPSPSPSPSPVASSSLPPANALAPALLFNDAITNTFAVSASLFTAVSAAAFLF