CuGenDBv2

Gene ID	CsGy7G006280
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like
Genome location	Gy14Chr7:4640055..4643507
RNA-Seq Expression	CsGy7G006280
Synteny	CsGy7G006280
Gene Ontology terms	GO:0009787 - regulation of abscisic acid-activated signaling pathway (biological process) GO:0010100 - negative regulation of photomorphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR039324 - Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588721.1 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1, partial [Cucurbita argyrosperma subsp. sororia]

2.25e-84

71.22

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSLPA LSPPSL+SIP SQL   TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD+IGGE++E++E++E+EE  EDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        VRFVEN+FRK S+RARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

XP_004136931.2 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Cucumis sativus]

1.45e-112

89.11

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
        MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF

Query:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
        VENIFRKSSRRARKAVRSVLPPSIPTKLV                      ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
Subjt:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP

Query:  AS
        AS
Subjt:  AS

XP_008455053.1 PREDICTED: uncharacterized protein LOC103495323 [Cucumis melo]

1.36e-101

82.18

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
        MSLPAVLSPPSLFSIPQSQ PF TS TSLLSHP  ISYTLLRATRRTSNFSQGVDNFVD+RRNWNRSDFDLIGGEEEEEEEE+ED+++EEDRSLDLLVRF
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF

Query:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
        VEN+FRKSSRRARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRL Q DDDQHHAWTGAQP
Subjt:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP

Query:  AS
        AS
Subjt:  AS

XP_022988955.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like [Cucurbita maxima]

1.59e-84

71.22

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSLPA LSPPSL+SIP SQ P  TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD+IGGE++E++E++E+EE  EDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        VRFVEN+FRK S+RARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

XP_038877542.1 protein SHORT HYPOCOTYL IN WHITE LIGHT 1 [Benincasa hispida]

2.73e-89

75.61

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSL A LSPPSLFSIPQSQ PF TS TSLLSHP  IS+TLLRA+RRTSNFSQGVDN VDDRRNWNRS   DFDLIGGEEEE+++ DEDE++EEDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        VRFVEN+FRK SRRARKAVRSVLP SIPTKLV                      ICTLGTAVF+SILIIRGVW GILYLQDTR+HRL QLDDDQH AWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQP S
Subjt:  AQPAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2W4 Uncharacterized protein

7.04e-113

89.11

Show/hide

Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
        MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF

Query:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
        VENIFRKSSRRARKAVRSVLPPSIPTKLV                      ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
Subjt:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP

Query:  AS
        AS
Subjt:  AS

A0A1S3C0Q8 uncharacterized protein LOC103495323

6.58e-102

82.18

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF
        MSLPAVLSPPSLFSIPQSQ PF TS TSLLSHP  ISYTLLRATRRTSNFSQGVDNFVD+RRNWNRSDFDLIGGEEEEEEEE+ED+++EEDRSLDLLVRF
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRF

Query:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP
        VEN+FRKSSRRARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRL Q DDDQHHAWTGAQP
Subjt:  VENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQP

Query:  AS
        AS
Subjt:  AS

A0A6J1EIN7 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

3.12e-84

70.73

Show/hide

Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSLPA LSPPSL+SIP SQL   TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD++GGE++E++E++E+EE  EDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        VRFVEN+FRK S+RARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

A0A6J1GJK6 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

3.12e-84

73.66

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSL A  SPPSLF++PQ Q PF TS T LLSHP  +S+ LLRA+RR SNFSQGVD+ VDDRRNWN S   DFDLIGGEEEEEEEEDEDEE  EDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        V+FVEN+FRK SRRARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVWIGILYLQD RSHRL QLDDDQ HAWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

A0A6J1JL13 protein SHORT HYPOCOTYL IN WHITE LIGHT 1-like

7.68e-85

71.22

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Query:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL
        MSLPA LSPPSL+SIP SQ P  TS TS+LSH + IS+TLLRA+RRTSNFSQGVD+ VDDRRNWNRS   DFD+IGGE++E++E++E+EE  EDRSLDLL
Subjt:  MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRS---DFDLIGGEEEEEEEEDEDEEDEEDRSLDLL

Query:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG
        VRFVEN+FRK S+RARKAVRSVLP SIPTKLV                      ICTLGTAVFVSILIIRGVW GILYLQD RSHR  +LDDDQHHAWTG
Subjt:  VRFVENIFRKSSRRARKAVRSVLPPSIPTKLV----------------------ICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTG

Query:  AQPAS
        AQPAS
Subjt:  AQPAS

SwissProt top hits

e value

%identity

Alignment

F4I3V6 Protein SHORT HYPOCOTYL IN WHITE LIGHT 1

5.4e-05

29.55

Show/hide

Query:  SLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFV
        +L +  S PSL  I  S    S +P S  S  +   +  L  +  +S+         DDR      ++D++   +++   +D+DEEDE + S+DLL+RF+
Subjt:  SLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFV

Query:  ENIFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQ
         ++F+K S+R +KA R +LP ++  +L                      VIC LG  VF  IL+IR  W    + Q
Subjt:  ENIFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G69935.1 short hypocotyl in white light1

3.8e-06

29.55

Show/hide

Query:  SLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFV
        +L +  S PSL  I  S    S +P S  S  +   +  L  +  +S+         DDR      ++D++   +++   +D+DEEDE + S+DLL+RF+
Subjt:  SLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFV

Query:  ENIFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQ
         ++F+K S+R +KA R +LP ++  +L                      VIC LG  VF  IL+IR  W    + Q
Subjt:  ENIFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQ

AT4G33780.1 FUNCTIONS IN: molecular_function unknown

7.4e-34

45.73

Show/hide

Query:  AVLSPPSLFSIPQSQLPFST-SPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVEN
        ++ SP S  ++ +S L F   +P +L+     IS     A+RR+ +F  G D+F DD R+WNR      G +E+ + EED+D+ +EEDRSLDLL+RFVEN
Subjt:  AVLSPPSLFSIPQSQLPFST-SPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVEN

Query:  IFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS
        +FRK S+RARKAVRS+LP SI TKL                      V CTLGT VF SIL+IRG+W G+ Y+Q++R++R+ +L DD   AW G QP S
Subjt:  IFRKSSRRARKAVRSVLPPSIPTKL----------------------VICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCCTTACCTGCCGTTCTTTCACCGCCGTCCCTTTTCTCCATTCCTCAATCTCAACTGCCATTTTCAACTTCTCCAACCTCGCTTCTTTCTCATCCCATCCAT
ATTTCCTACACGCTCCTCCGGGCTACCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATAATTTTGTGGACGATCGGCGTAATTGGAACCGCTCCGACTTCGAC
TTAATTGGTGGAGAGGAGGAGGAGGAGGAGGAGGAGGACGAAGATGAGGAGGACGAAGAGGATAGAAGTTTGGATCTGTTGGTTCGTTTTGTTGAGAATATTTTT
AGGAAATCATCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCTCCATCCATCCCTACTAAACTGGTGATATGCACACTTGGAACTGCAGTGTTTGTGAGC
ATACTCATCATTCGTGGAGTGTGGATTGGCATTTTATATCTGCAAGATACCCGCAGCCACAGACTCGGACAACTCGATGATGATCAGCACCATGCCTGGACTGGT
GCTCAACCTGCATCCTGA

mRNA sequence

Show/hide mRNA sequence

GAGAAATTATGTATAAGTAATTCTAAAACTGCTTCATCCTTTCGAACAACAAACAAAATCACCTGAGCCCGTAAACTACTCTTTCTTCTTCAACAACTGACTATG
TCCTTACCTGCCGTTCTTTCACCGCCGTCCCTTTTCTCCATTCCTCAATCTCAACTGCCATTTTCAACTTCTCCAACCTCGCTTCTTTCTCATCCCATCCATATT
TCCTACACGCTCCTCCGGGCTACCAGAAGAACCTCCAATTTCTCTCAGGGAGTTGATAATTTTGTGGACGATCGGCGTAATTGGAACCGCTCCGACTTCGACTTA
ATTGGTGGAGAGGAGGAGGAGGAGGAGGAGGAGGACGAAGATGAGGAGGACGAAGAGGATAGAAGTTTGGATCTGTTGGTTCGTTTTGTTGAGAATATTTTTAGG
AAATCATCGAGGCGAGCTCGGAAGGCTGTGAGATCGGTTCTTCCTCCATCCATCCCTACTAAACTGGTGATATGCACACTTGGAACTGCAGTGTTTGTGAGCATA
CTCATCATTCGTGGAGTGTGGATTGGCATTTTATATCTGCAAGATACCCGCAGCCACAGACTCGGACAACTCGATGATGATCAGCACCATGCCTGGACTGGTGCT
CAACCTGCATCCTGAATGCTTCAATCACTTGGCTACTTACAAACCACAAGGTAAGTGGACAACTC

Protein sequence

Show/hide protein sequence

MSLPAVLSPPSLFSIPQSQLPFSTSPTSLLSHPIHISYTLLRATRRTSNFSQGVDNFVDDRRNWNRSDFDLIGGEEEEEEEEDEDEEDEEDRSLDLLVRFVENIF
RKSSRRARKAVRSVLPPSIPTKLVICTLGTAVFVSILIIRGVWIGILYLQDTRSHRLGQLDDDQHHAWTGAQPAS

CsGy7G006280 (gene) of Cucumber (Gy14) v2.1 genome