CuGenDBv2

Gene ID	CsGy7G006470
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein S29
Genome location	Gy14Chr7:4816913..4819661
RNA-Seq Expression	CsGy7G006470
Synteny	CsGy7G006470
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z IPR043140 - Ribosomal protein S14/S29

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GAV64779.1 Ribosomal_S14 domain-containing protein [Cephalotus follicularis]

3.83e-36

94.74

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIK  F
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF

KAG5061716.1 hypothetical protein JHK87_002745 [Glycine soja]

4.05e-36

96.43

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQM
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK +
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQM

KOM36224.1 hypothetical protein LR48_Vigan02g237400 [Vigna angularis]

5.20e-37

93.33

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLK
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK+  N+K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLK

QCE08455.1 small subunit ribosomal protein S29e [Vigna unguiculata]

4.28e-36

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLKQRFNNLSTPKNHVLSQ
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK           +S P N ++++
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLKQRFNNLSTPKNHVLSQ

RXH87454.1 hypothetical protein DVH24_034354 [Malus domestica]

1.26e-36

94.83

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFN
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK + N
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFN

TrEMBL top hits

e value

%identity

Alignment

A0A0L9U1C0 Uncharacterized protein

2.52e-37

93.33

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLK
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK+  N+K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLK

A0A1Q3BA54 Ribosomal_S14 domain-containing protein

1.85e-36

94.74

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIK  F
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF

A0A498IZC1 Uncharacterized protein

6.11e-37

94.83

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFN
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK + N
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFN

A0A4D6N8J1 Small subunit ribosomal protein S29e

2.07e-36

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLKQRFNNLSTPKNHVLSQ
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK           +S P N ++++
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLKQRFNNLSTPKNHVLSQ

F6HXU9 Uncharacterized protein

8.25e-37

96.49

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK  F
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMF

SwissProt top hits

e value

%identity

Alignment

Q4PM47 40S ribosomal protein S29

7.0e-18

70.37

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q5I7K3 40S ribosomal protein S29

2.7e-25

90.74

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q680P8 40S ribosomal protein S29

1.6e-25

92.59

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q6F473 40S ribosomal protein S29

1.6e-17

68.52

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q7XYB0 40S ribosomal protein S29

1.1e-18

68.52

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Arabidopsis top hits

e value

%identity

Alignment

AT3G43980.1 Ribosomal protein S14p/S29e family protein

1.1e-26

92.59

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

AT3G44010.1 Ribosomal protein S14p/S29e family protein

1.1e-26

92.59

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

AT4G33865.1 Ribosomal protein S14p/S29e family protein

1.1e-26

92.59

Show/hide

Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGCCCCGGCTCTCGCACCTGCCGGGTTTGCGGAAATCCTCATGGTTTGATCAGAAAGTATGGA
CTTATGTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGATTCATCAAGCAAATGTTCAACCTCAAACAAAGATTCAACAATTTGAGTACCCCAAAG
AACCATGTTTTATCTCAGTTGGACTAA

mRNA sequence

Show/hide mRNA sequence

TGAAATGATTGCCAAAGGCTAGGGTTTCCTCTCAGCTCTTCCCTATAAATACTTAACTTCTTCTCTTTGGTTGGTTCTTCAAAAAAGCATTTGCCTCCTTATAGG
ATTTTCGTAGCCCTAACGAGCTTCTCTGATTTCCTTCTCGCAAGCAATCCAAACATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGCCCCGGC
TCTCGCACCTGCCGGGTTTGCGGAAATCCTCATGGTTTGATCAGAAAGTATGGACTTATGTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGATTC
ATCAAGCAAATGTTCAACCTCAAACAAAGATTCAACAATTTGAGTACCCCAAAGAACCATGTTTTATCTCAGTTGGACTAACCCCCACATCATTCAGACCATTGA
CCCTTCAACATTGTTGCCAATATACTTGCAACCTTCTATGATTGGCTTCTTTAGGTGTTCTTTCAAAATCCAGTGTATGCCACCACGACAAAGAGACTCCCAACC
ATGTTGTGTCCATATTTAGTTTCCAATAACCTTCCTTGGAGGTATAGACTCTATTTATATGTTCATCCAAAATAAGGTTTAAGTGAGTTTGAAGGTTCTATCTAG
TGGAACTCAAAGGCCAAGGCTAGAAGGAGGGCAAATTGTGACTATTACATTTATACTAATCATTTTTTCTGAAAGTCGAACTACTCTAAATAATGTTAGATTTTC
ATATTTTTAGGTTCTAATGAGTTTGACATGTGTAAGGGATAAATTGATATTTTTACTATAATGTATAAATTTCACAAAATACAAAATATATATATATATATAGAC
TTTGAAATAACACTAATATAAATATACTATAAATAACAGAGATATTGGACATTTTTTTTACAATGATACTTTAAACTTTGATTAGAAAACTGCTTTTAACTAAAA
TACAATAATAAAGAACTAAAGTTCACTCCACAAAACACT

Protein sequence

Show/hide protein sequence

MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKQMFNLKQRFNNLSTPKNHVLSQLD

CsGy7G006470 (gene) of Cucumber (Gy14) v2.1 genome