; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy7G006590 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G006590
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPUM-HD domain-containing protein
Genome locationGy14Chr7:4853339..4854523
RNA-Seq ExpressionCsGy7G006590
SyntenyCsGy7G006590
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]1.21e-17598.78Show/hide
Query:  RHRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISP
        RHRLVV LISHLKYPCQQWMIV LMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISP
Subjt:  RHRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISP

Query:  LIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSI
        LIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEG+SNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSI
Subjt:  LIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSI

Query:  AKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV
        AKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV
Subjt:  AKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]2.43e-9286.62Show/hide
Query:  HRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPL
        +R+VVTLISHLKYPCQQWMI  LM PHVLTLAKDF  GHRVIKSCFQ+F PQ NELI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PL
Subjt:  HRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPL

Query:  IQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCL
        I+D YDLSKHPYGNYVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+
Subjt:  IQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCL

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]1.45e-6046.03Show/hide
Query:  VVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQD
        VV L+  L  P  Q +   ++  H + LAK    GH V+ +CF+N   Q NE+I+L +A N LELA+ +  CCIL  CI Y+   LR    VL++PLIQ+
Subjt:  VVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQD

Query:  VYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGK
           LS H Y N+VIQF+I+LD  NIG R+I+ L +KFVEL + K GS+VVEKCL C E  +  IIFEI+E   ++  IQ+ TNQYGN+V Q  +S+AKG+
Subjt:  VYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGK

Query:  IRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLS
           LL +AIKS   +L+ H YGR+V+++  + K+++ +S
Subjt:  IRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLS

XP_022725062.1 putative pumilio homolog 8, chloroplastic [Durio zibethinus]9.70e-4134.36Show/hide
Query:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY
        Q+ +++S+++P  +TL  D H GH +I+ CF  F  +  +L++  + ++CL++A  ++ CC+LQ+C++++    R+    L++ +  + + LS+HPYGNY
Subjt:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY

Query:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCC-EGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKS
        V+Q+++ +   ++   II  L   +V LSM+KYGSNVVEKCL    EG S  II EI+      +++Q   + YGN+VVQ+ + ++KG +   L + I+ 
Subjt:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCC-EGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKS

Query:  HWLVLQQHLYGRNVISSIRRDKKKAKL
        H+  L  HL+G+ V++  +  K + +L
Subjt:  HWLVLQQHLYGRNVISSIRRDKKKAKL

XP_031126758.1 putative pumilio homolog 8, chloroplastic [Ipomoea triloba]1.52e-4036.64Show/hide
Query:  TLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVY
        T++ HL    Q+ ++VS++R   +TL K  + GH VI+ C + F  +  + I+  +A NCL++A  ++ CC+LQ C+E ++    Q +E L++ +  +  
Subjt:  TLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVY

Query:  DLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGV-SNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKI
         LS+HPYGNYV+Q ++ L   ++   I+K+L   FV LSM+KYGSNVVEKCL   E   +  ++ EI+       L+Q   +QYGN+V Q+ ++I KG  
Subjt:  DLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGV-SNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKI

Query:  RKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK
        R  +   I  H+  L  H YG+ V++  R +K
Subjt:  RKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein6.98e-13398.95Show/hide
Query:  ELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVE
        +LIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVE
Subjt:  ELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVE

Query:  KCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV
        KCLSCCEG+SNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV
Subjt:  KCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLSKYV

A0A1S3C139 putative pumilio homolog 8, chloroplastic1.18e-9286.62Show/hide
Query:  HRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPL
        +R+VVTLISHLKYPCQQWMI  LM PHVLTLAKDF  GHRVIKSCFQ+F PQ NELI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PL
Subjt:  HRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPL

Query:  IQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCL
        I+D YDLSKHPYGNYVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+
Subjt:  IQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like7.00e-6146.03Show/hide
Query:  VVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQD
        VV L+  L  P  Q +   ++  H + LAK    GH V+ +CF+N   Q NE+I+L +A N LELA+ +  CCIL  CI Y+   LR    VL++PLIQ+
Subjt:  VVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQD

Query:  VYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGK
           LS H Y N+VIQF+I+LD  NIG R+I+ L +KFVEL + K GS+VVEKCL C E  +  IIFEI+E   ++  IQ+ TNQYGN+V Q  +S+AKG+
Subjt:  VYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGK

Query:  IRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLS
           LL +AIKS   +L+ H YGR+V+++  + K+++ +S
Subjt:  IRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKKAKLS

A0A6P5XBS2 putative pumilio homolog 8, chloroplastic4.70e-4134.36Show/hide
Query:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY
        Q+ +++S+++P  +TL  D H GH +I+ CF  F  +  +L++  + ++CL++A  ++ CC+LQ+C++++    R+    L++ +  + + LS+HPYGNY
Subjt:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY

Query:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCC-EGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKS
        V+Q+++ +   ++   II  L   +V LSM+KYGSNVVEKCL    EG S  II EI+      +++Q   + YGN+VVQ+ + ++KG +   L + I+ 
Subjt:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCC-EGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKS

Query:  HWLVLQQHLYGRNVISSIRRDKKKAKL
        H+  L  HL+G+ V++  +  K + +L
Subjt:  HWLVLQQHLYGRNVISSIRRDKKKAKL

A0A6P6W406 putative pumilio homolog 8, chloroplastic1.03e-4036.05Show/hide
Query:  LISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYD
        L+ H+  P Q+ +++S +R   +TL K  ++GH V++ C + F  +  + I+  VA NCL++A  ++ CC+LQ+C+E++    R   + LI+ +  +   
Subjt:  LISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYD

Query:  LSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLS-CCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIR
        LS+HPYGNYV+QF+I L    I   I+ +L   +V LSM+KYGSNVVEKC+    E  +  II EI+   G    + +  + +GN+V Q+  +IAKG IR
Subjt:  LSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLS-CCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIR

Query:  KLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKK
          +   I+ H+  L  H +G+ V++  R  K++
Subjt:  KLLEKAIKSHWLVLQQHLYGRNVISSIRRDKKK

SwissProt top hitse value%identityAlignment
P0DN95 Pumilio homolog 151.7e-2532.84Show/hide
Query:  LTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNI
        L L KD    HRVI  CF  F P     ++  + QNC ++A  Q  CC+L++ I  S+   R+L++ LI  +I     L  + YGNYV+Q++++L    +
Subjt:  LTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNI

Query:  GRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNV
           + K L   +V+LS DKYGS+VV+KCL   E  S  II E+L       +  +  + YG++V+QT   +++  +R +L   I  +   ++ ++YGR +
Subjt:  GRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNV

Query:  ISSI
        +  +
Subjt:  ISSI

P25339 Pumilio homology domain family member 49.3e-2430.54Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R +  LI  +K   +  ++V  +RP+ + L+KD +  H VI+ C Q   P++ + I   ++ +C+++A  +  CC+LQ C+++      +  + L   L+
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGT----NIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVM
          V  L+  P+GNYV+Q++I  +      +   +I+  L  + +ELS+ K+GSNV+EK L     VS  +I EIL   G   +  +  + YGN+V+QT +
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGT----NIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVM

Query:  SIA
         I+
Subjt:  SIA

Q9C9R6 Putative pumilio homolog 7, chloroplastic5.2e-2731.44Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R+V  L+  ++   Q  ++   +RP  L L KD +  H VI+ C Q    + N+ I     + C E+A  +  CC+LQ+CI YS   +RQ +E LI+ + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
        ++   L++ P+GNY +QF+I+L   +    ++ +L   +V+LSM K+ S++VE+CL  C      I+ E++     D+L+Q   + Y NFV+Q  ++  K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS
        G +   L + I+ H  +L+ + Y + + S
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS

Q9LM20 Putative pumilio homolog 8, chloroplastic7.3e-2931.88Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R+V  L+  +K   Q  ++ S +RP  L L +D +  H VI+ C Q    + NE I     + C+++A  +  CC+LQ+CI YS+   R   E L++ + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
        ++   L++ PYGNY +QF+++L   +    ++ +L   +VELSM K+ S++VE+CL+ C      I+ E++     D LIQ   + Y NFV+Q  +++ K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS
        G +   L + I+ H  +L+ + Y + + S
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS

Q9LVC3 Pumilio homolog 122.1e-2831.91Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R V  ++   K   +  +I+S ++  ++ L K+ +  H V++ C Q  LP   + +      +C+ELA  +  CC+LQ+C+ YS    +Q    L+S + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
         +   LS+ P+GNYV+Q++ +L        I+++L   + ELSM K  SNVVEKCL   +      I   L   G  RL Q+  + YGN+V+Q  +  +K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK
        G +  LL  AIK +   L+ + YG+ V+S++   K
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 85.2e-3031.88Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R+V  L+  +K   Q  ++ S +RP  L L +D +  H VI+ C Q    + NE I     + C+++A  +  CC+LQ+CI YS+   R   E L++ + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
        ++   L++ PYGNY +QF+++L   +    ++ +L   +VELSM K+ S++VE+CL+ C      I+ E++     D LIQ   + Y NFV+Q  +++ K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS
        G +   L + I+ H  +L+ + Y + + S
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS

AT1G35730.1 pumilio 96.6e-2531.46Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R+V  +I  +K   Q  ++ S ++P  L L KD +  H VI+SC Q   P  NE ++    + C E+A  +  CC+LQ CI   +N++   +E L++ + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
        ++   LS+ P+GNYV+Q++I    + +  +++ +    + EL+  K+ S+V+EKCL        +I+ E+L     + L+Q   + Y N+V+QT +S+ K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIR-KLLEKAIK
        G +R KL+ K  +
Subjt:  GKIR-KLLEKAIK

AT1G78160.1 pumilio 73.7e-2831.44Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R+V  L+  ++   Q  ++   +RP  L L KD +  H VI+ C Q    + N+ I     + C E+A  +  CC+LQ+CI YS   +RQ +E LI+ + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
        ++   L++ P+GNY +QF+I+L   +    ++ +L   +V+LSM K+ S++VE+CL  C      I+ E++     D+L+Q   + Y NFV+Q  ++  K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS
        G +   L + I+ H  +L+ + Y + + S
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVIS

AT3G20250.1 pumilio 53.1e-2225.81Show/hide
Query:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY
        Q+  ++  +  +VL   +D  +G+ VI+ C ++        +I         L+     C ++Q  +E+ +++  +    +I  +++  + L+   YGNY
Subjt:  QQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGNY

Query:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRD--RLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIK
        V Q +++    +  R+II++LT   V++S  KY SNVVEKCL   +    + + E + G   +   L+ +  +Q+ N+VVQ V+ I+K + R++L + +K
Subjt:  VIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRD--RLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIK

Query:  SHWLVLQQHLYGRNVIS
         H   L+++ YG+++++
Subjt:  SHWLVLQQHLYGRNVIS

AT5G56510.1 pumilio 121.5e-2931.91Show/hide
Query:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI
        R V  ++   K   +  +I+S ++  ++ L K+ +  H V++ C Q  LP   + +      +C+ELA  +  CC+LQ+C+ YS    +Q    L+S + 
Subjt:  RLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLI

Query:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK
         +   LS+ P+GNYV+Q++ +L        I+++L   + ELSM K  SNVVEKCL   +      I   L   G  RL Q+  + YGN+V+Q  +  +K
Subjt:  QDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAK

Query:  GKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK
        G +  LL  AIK +   L+ + YG+ V+S++   K
Subjt:  GKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRRDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGACATCGACTTGTGGTGACGTTAATCTCTCATCTTAAATACCCTTGTCAACAATGGATGATTGTATCACTTATGAGACCGCATGTCTTGACTTTGGCTAAAGA
CTTTCATAGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAATTTTTTGCCACAATCTAATGAGTTGATCATACTTAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAG
GACAGGCAAGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTGAGACAACTTCAAGAAGTTCTAATCTCTCCCTTGATTCAAGATGTCTATGATCTT
TCAAAACATCCTTATGGCAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGACGGAGAATAATCAAAGAACTTACACACAAATTTGTAGAACTTTC
CATGGACAAGTATGGAAGCAATGTAGTGGAAAAATGTCTATCTTGTTGTGAAGGTGTCTCTAATGACATTATCTTTGAAATTTTGGAGGGTAATGGTCGAGATCGACTCA
TCCAAATTTGTACAAACCAATATGGGAATTTTGTTGTTCAAACCGTCATGTCTATTGCTAAGGGAAAAATTCGCAAGTTGCTTGAAAAAGCCATTAAGAGTCATTGGCTT
GTTCTTCAACAGCATCTATATGGAAGAAATGTAATTTCATCAATTAGACGTGATAAAAAAAAGGCAAAATTATCGAAGTATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGACATCGACTTGTGGTGACGTTAATCTCTCATCTTAAATACCCTTGTCAACAATGGATGATTGTATCACTTATGAGACCGCATGTCTTGACTTTGGCTAAAGA
CTTTCATAGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAATTTTTTGCCACAATCTAATGAGTTGATCATACTTAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAG
GACAGGCAAGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTGAGACAACTTCAAGAAGTTCTAATCTCTCCCTTGATTCAAGATGTCTATGATCTT
TCAAAACATCCTTATGGCAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGACGGAGAATAATCAAAGAACTTACACACAAATTTGTAGAACTTTC
CATGGACAAGTATGGAAGCAATGTAGTGGAAAAATGTCTATCTTGTTGTGAAGGTGTCTCTAATGACATTATCTTTGAAATTTTGGAGGGTAATGGTCGAGATCGACTCA
TCCAAATTTGTACAAACCAATATGGGAATTTTGTTGTTCAAACCGTCATGTCTATTGCTAAGGGAAAAATTCGCAAGTTGCTTGAAAAAGCCATTAAGAGTCATTGGCTT
GTTCTTCAACAGCATCTATATGGAAGAAATGTAATTTCATCAATTAGACGTGATAAAAAAAAGGCAAAATTATCGAAGTATGTTTGA
Protein sequenceShow/hide protein sequence
MVRHRLVVTLISHLKYPCQQWMIVSLMRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDL
SKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGVSNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWL
VLQQHLYGRNVISSIRRDKKKAKLSKYV