; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy7G007160 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G007160
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationGy14Chr7:5154394..5158701
RNA-Seq ExpressionCsGy7G007160
SyntenyCsGy7G007160
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031301.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa]2.72e-15289.8Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQ
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ

XP_004136978.1 cold-regulated protein 27 isoform X1 [Cucumis sativus]2.31e-178100Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

XP_008454952.1 PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]2.78e-15489.84Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQV
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

XP_011658902.1 cold-regulated protein 28 isoform X2 [Cucumis sativus]1.44e-13783.74Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSE+         + +I                       H  S  KQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]1.30e-11970Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP
        M D+HTPS +SPP+ADR+SPM ++++  D T  NSES+SSS T+D S+       SHHC QLDA QTHWT+EKHRL+LDSLEASFVQDLH++R + ALS 
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP

Query:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR
        KQKMRRKPI P+ISSSE MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   
Subjt:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVNHGTTLDFSLD
        PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKASSD S + +V  G  +DFSL+
Subjt:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVNHGTTLDFSLD

TrEMBL top hitse value%identityAlignment
A0A0A0K7Z2 Uncharacterized protein1.12e-178100Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
        CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X11.35e-15489.84Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQV
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

A0A5D3C4A3 Cold regulated protein 27, putative isoform 21.32e-15289.8Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK
        MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLDAEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQK
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQK

Query:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC
        MRRKPI  D SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHIR+MTNSC SARNSQ TRPCC
Subjt:  MRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCC

Query:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ
         NSYTIITEVSDQNFVDNQPGELS GMP AKRLKKASS F D+AQ
Subjt:  CNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQ

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X25.11e-11671.08Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP
        M D+HTPS +SPP+ADR+SPM ++++  D T  NSES+SSS T+D S+       SHHC QLDA QTHWT+EKHRL+LDSLEASFVQDLH++R + ALS 
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP

Query:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR
        KQKMRRKPI P+ISSSE MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   
Subjt:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV
        PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKASSD S + +V
Subjt:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQV

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X16.29e-12070Show/hide
Query:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP
        M D+HTPS +SPP+ADR+SPM ++++  D T  NSES+SSS T+D S+       SHHC QLDA QTHWT+EKHRL+LDSLEASFVQDLH++R + ALS 
Subjt:  MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKH---FFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSP

Query:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR
        KQKMRRKPI P+ISSSE MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   
Subjt:  KQKMRRKPIRPDISSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTR

Query:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVNHGTTLDFSLD
        PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKASSD S + +V  G  +DFSL+
Subjt:  PCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDFSDSAQVNHGTTLDFSLD

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 277.0e-0627.55Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S   +   +   SS       +N
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN

Q8L983 Cold-regulated protein 281.2e-0533.61Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  YLD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)8.4e-0733.61Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  YLD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown8.4e-0733.61Show/hide
Query:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA
        ASA + S    S S  S +T + S+   D    S+LD E T WT+EKH  YLD LE+SFV+ L+    +     ++  R + ++ +   S+ +  VLQ+ 
Subjt:  ASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI--SSSELMVLQDA

Query:  SWQKANIGRNDPLLDKTAD
         WQK N G+    L+ +++
Subjt:  SWQKANIGRNDPLLDKTAD

AT5G42900.1 cold regulated gene 274.9e-0727.55Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S   +   +   SS       +N
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN

AT5G42900.2 cold regulated gene 274.9e-0727.55Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN
        +    K     T +   +  S S+ +     + S  S +                 EVSDQNFV +   GE  S   +   +   SS       +N
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN

AT5G42900.3 cold regulated gene 277.6e-0828.43Show/hide
Query:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH
        +T WT+EKH LYL S+EASFV  L  +  + AL   + +         RKP     S  +  VL D  WQK N+ + +  ++     +S   L   WI H
Subjt:  QTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMR--------RKPIRPDISSSELMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINH

Query:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARN-SQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN
        +    K     T +   +  S S+ +     + S  S +  S  +R    +  ++  EVSDQNFV +   GE  S   +   +   SS       +N
Subjt:  FPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARN-SQPTRPCCCNSYTIITEVSDQNFV-DNQPGELSSGMPIAKRLKKASSDFSDSAQVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACTCTCATACGCCGTCGTTTCTCTCCCCGCCGCTTGCAGATCGACAATCACCCATGCCGCTGGCCTCTGCTACTACCGACTCCACTGGCTTCAACTCGGAATC
TCACTCTTCTTCCATTACTCTTGATGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTCGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTAT
ATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATA
TCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGA
TCTATGGATAAATCATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGA
CGAACTCCTGTAGATCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCA
GGAGAGTTGTCTAGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGCCCAGGTTAATCATGGGACTACCTTAGACTTTTCTTTAGA
TATCTTATAA
mRNA sequenceShow/hide mRNA sequence
TTTTCGCCCCCAAAAAAAAACCACAAAACAAACTTCTTTCACCGCTTCTCTCTCTCTCTCTCTCTCCCTCTCCATTTCTCCACGAGCTTGAATCCCCAGAGGGTTTCGGA
CCTAAATTTTCTCCCACCATTTCAATTTTCTCTTTGATTTCATCCTCCATTTTTGGCTCTTCCGAATCGTTTCTCCTTCTTTTTGATCCCTCCGAAATGGGTGACTCTCA
TACGCCGTCGTTTCTCTCCCCGCCGCTTGCAGATCGACAATCACCCATGCCGCTGGCCTCTGCTACTACCGACTCCACTGGCTTCAACTCGGAATCTCACTCTTCTTCCA
TTACTCTTGATGGGTCCAAGCATTTTTTCGATTCTCATCATTGTTCGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATTATATCTTGATTCTTTA
GAAGCATCTTTTGTCCAAGATTTGCATCAACATAGGCCTATGCATGCTTTATCCCCAAAACAGAAGATGCGTCGGAAGCCGATCAGGCCTGATATATCTTCTTCAGAGTT
GATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATC
ATTTTCCTTCTGCAGGAAAGCAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGAAAGTTGTAGTGATAGGAGACACATAAGATACATGACGAACTCCTGTAGA
TCTGCCAGAAATTCTCAGCCGACCCGTCCATGCTGTTGTAATTCTTATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTAG
TGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGATTTTTCAGACAGTGCCCAGGTTAATCATGGGACTACCTTAGACTTTTCTTTAGATATCTTATAATTTC
ATCATCTAAATGATCTGAGACTGATATGCTGCTATTAATCTCTTAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATAAAAAACCAGATGGCATATCTTCTGAGCAT
CTTCAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGCGTAAGAGGGAGCGACAACAATTCATTCCAACATGTGAACAGCCAGATTTGTGATACGGTTTTGTTTTC
ATTTCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAGAAAATATGTTTGTATATGGTACAAGCTAAACTT
TTACGTAGTTCAAATATTGAGTGAAATACATGTTGACCCTATCTTTTCTCCTGGTTTCCTTTTTCTTGGAGTTTAAAAGGATGGAAATTCTACAACTAGATGTAGGGAAA
GAATATACATGCTATAGAGAAGCTAGACACCCTGATAGTGAGATAGATACACAACCTTTTTAAATTTGTTTGAAATACTCCCATTATTAAGTTTTGTTAGAAACCTCAAG
TGTAAATCATTACATAAATCAAAATGTGTCATTCTTTTGTGACACTGAAAAAGAGTTGAGCAAACTTATTGATTTTCTTTATGGGGTAAAGTTTTTTCATTGTATTGTTA
TCTTGTTGTAGTACTCTTACCGAATGATTTGATATTTGTTACTTTTGCTGGTTGCATTTGTAATTTCTACTTCAACTTAGCTTCATCTAGATCTATTTTTCTCACTCTGC
TTCTAGGCAACAACATTTGGGCTCGAGCATTTTTGAGGACATAATTACACGTAATAAAATAATAGAGCCTTTCTCTTGTTTATGGAGTCTATCTCAGATGGTTGATGACA
ATATACTTACAGGGTTTATGGAGTCTATCTCAGATGGTTGATGACAATATACTTACAGGGTT
Protein sequenceShow/hide protein sequence
MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDI
SSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQP
GELSSGMPIAKRLKKASSDFSDSAQVNHGTTLDFSLDIL