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CsGy7G007880 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G007880
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationGy14Chr7:6056988..6058657
RNA-Seq ExpressionCsGy7G007880
SyntenyCsGy7G007880
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048284.1 RPM1-interacting protein 4-like isoform X2 [Cucumis melo var. makuwa]5.54e-3896.83Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP

KAE8645904.1 hypothetical protein Csa_011859 [Cucumis sativus]6.20e-77100Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVR
        DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVR
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVR

Query:  LEATVEKLHIIL
        LEATVEKLHIIL
Subjt:  LEATVEKLHIIL

XP_004148923.1 protein NOI4 [Cucumis sativus]3.32e-4084.42Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP         W C +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL

XP_008463014.1 PREDICTED: RPM1-interacting protein 4-like isoform X1 [Cucumis melo]6.23e-3896.83Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP

XP_008463015.1 PREDICTED: RPM1-interacting protein 4-like isoform X2 [Cucumis melo]1.58e-3881.82Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP         W C +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL

TrEMBL top hitse value%identityAlignment
A0A0A0K6Y6 AvrRpt-cleavage domain-containing protein6.51e-79100Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKK
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKK
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKK

Query:  VRLEATVEKLHIIL
        VRLEATVEKLHIIL
Subjt:  VRLEATVEKLHIIL

A0A1S3CI83 RPM1-interacting protein 4-like isoform X13.01e-3896.83Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP

A0A1S3CI91 RPM1-interacting protein 4-like isoform X27.64e-3981.82Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP         W C +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL

A0A5A7TZ14 RPM1-interacting protein 4-like isoform X22.68e-3896.83Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGR APDPAK PP
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPP

A0A6J1ID15 uncharacterized protein LOC111474733 isoform X25.99e-3677.92Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL
        MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDA GR+  DPAK PP         W C +
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLL

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.3e-2064.2Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPNATCVPLGNWFCLLLA
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P         W C + A
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPNATCVPLGNWFCLLLA

Q8GYN5 RPM1-interacting protein 44.0e-0642.86Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH
        +K   +PKFG+WD N+P+SA+G+T IFNK R+E+ +G       +   H
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAH

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein8.6e-2063.29Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLA
        M DKGRPLPKFGEWDVNDP+SAEGFTVIFNKAR+EKK GGK DSPGK D  G N              P   WFC + A
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLA

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein3.9e-1258.18Show/hide
Query:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK
        RPLPKFGEWDVNDP SAEGFTVIF KARD+KKT     +  +   + ++  +P K
Subjt:  RPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAK

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein3.5e-2175.38Show/hide
Query:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPP
        M+DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P
Subjt:  MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPP

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein2.3e-2076.19Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPP
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPP

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein5.9e-2164.56Show/hide
Query:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPNATCVPLGNWFCLLLA
        DKGRPLPKFGEWDVNDP SAEGFTVIFNKARDEKKTGGKP SPGK  + H ++   DP+K  P         W C + A
Subjt:  DKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGK-VDAHGRN-APDPAKTPPNATCVPLGNWFCLLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGT
TTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTT
CATATTATTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGACAAAGGTCGGCCATTGCCAAAATTTGGTGAGTGGGATGTTAATGATCCGACATCGGCTGAGGGTTTCACTGTGATTTTCAACAAAGCTAGAGATGAGAAGAA
AACAGGCGGCAAACCTGATTCACCTGGAAAAGTTGATGCACATGGCAGGAATGCACCAGATCCTGCCAAGACACCTCCTAATGCTACTTGTGTTCCTTTGGGCAATTGGT
TTTGTCTGTTGCTTGCTTCTGATAGTGTGATAAGAAATGGCTTTGCTGTATTCAAAGTCCCACTGCTGAATCTTAAGAAGGTTCGTTTAGAAGCTACAGTTGAAAAACTT
CATATTATTCTGTAA
Protein sequenceShow/hide protein sequence
MTDKGRPLPKFGEWDVNDPTSAEGFTVIFNKARDEKKTGGKPDSPGKVDAHGRNAPDPAKTPPNATCVPLGNWFCLLLASDSVIRNGFAVFKVPLLNLKKVRLEATVEKL
HIIL