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CsGy7G008030 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G008030
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPre-mRNA-splicing factor like
Genome locationGy14Chr7:7488255..7491299
RNA-Seq ExpressionCsGy7G008030
SyntenyCsGy7G008030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150791.2 uncharacterized protein LOC101216518 [Cucumis sativus]4.15e-93100Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
XP_008462996.1 PREDICTED: uncharacterized protein LOC103501243 [Cucumis melo]5.45e-8996.35Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE DQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLK KLKEADRRTT GRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVG GKSSTNM KGSSRDWLDPHCHEAEFEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
XP_022139462.1 uncharacterized protein LOC111010385 [Momordica charantia]8.70e-8692.7Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSV+K PP EEDEWDTDGFVIPSLGIEE DQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLKQKLKEADRRTTTGRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEA+FEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
XP_022975858.1 uncharacterized protein LOC111476432 [Cucurbita maxima]8.94e-8490.65Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE
        MDPSSV KAPP EEDEWDTDGFVIPSLGIEE   DQT+V SPKVEI+EPPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEA+FEK
Subjt:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
XP_038898121.1 uncharacterized protein LOC120085905 [Benincasa hispida]9.05e-8893.43Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSV K PP EEDEWDTDGFVIPSLGIEE +QT+ GSPKVEI+EPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEA+FEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
TrEMBL top hitse value%identityAlignment
A0A0A0K8B7 Uncharacterized protein2.01e-93100Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
A0A1S3CJS1 uncharacterized protein LOC1035012432.64e-8996.35Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE DQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLK KLKEADRRTT GRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVG GKSSTNM KGSSRDWLDPHCHEAEFEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
A0A6J1CE06 uncharacterized protein LOC1110103854.21e-8692.7Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK
        MDPSSV+K PP EEDEWDTDGFVIPSLGIEE DQT+VGSP+VEI EPPPK KEETTIYLGPHGAPPSQSKQDLN TNRKQRLKQKLKEADRRTTTGRENK
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENK

Query:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEA+FEK
Subjt:  LENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
A0A6J1F787 uncharacterized protein LOC1114427435.05e-8389.21Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE
        MDPSSV KAPP EEDEWDTDGFVIPSLGIEE   DQT+V SP+VEI++PPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEA+FEK
Subjt:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
A0A6J1IKG2 uncharacterized protein LOC1114764324.33e-8490.65Show/hide
Query:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE
        MDPSSV KAPP EEDEWDTDGFVIPSLGIEE   DQT+V SPKVEI+EPPPKVKEE TIYLGPHGAPPSQSKQDLNP NRK RLKQKLKEADRRTTTGRE
Subjt:  MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEE--ADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRE

Query:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
        NKLENLRELVGGGKSSTNM KGSSRDWLDPHCHEA+FEK
Subjt:  NKLENLRELVGGGKSSTNMAKGSSRDWLDPHCHEAEFEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55640.1 unknown protein1.1e-3458.62Show/hide
Query:  MDPSSVRKAPPAEE--DEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEP-PPKVKEETTIYLGPHGAPPSQSKQ-DLNPTNRKQRLKQKLKEADRRTT-T
        MD S ++   P  E  DEWDTDGFVIPSL IEE         +VE  +P  PK K E  IYLGPHGAPPSQ +    N ++RKQR KQ LKEAD++ + +
Subjt:  MDPSSVRKAPPAEE--DEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEP-PPKVKEETTIYLGPHGAPPSQSKQ-DLNPTNRKQRLKQKLKEADRRTT-T

Query:  GRENKLENLRELVGGG---KSSTNMAKGSSRDWLDPHCHEAEFEK
        GRENK+ NLRELVGGG   +  TNM KG SRDWLDPHCHE++FEK
Subjt:  GRENKLENLRELVGGG---KSSTNMAKGSSRDWLDPHCHEAEFEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCGTCGTCAGTGCGCAAAGCTCCTCCAGCTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAGGCAGACCAAACAAGAGT
TGGTTCTCCAAAAGTAGAAATCGAAGAACCTCCCCCAAAGGTTAAAGAAGAGACGACGATCTATCTTGGCCCACATGGCGCACCACCATCACAGTCAAAACAAGATTTGA
ACCCCACCAATCGTAAGCAACGGTTAAAGCAGAAATTGAAGGAAGCAGACCGGAGGACCACGACAGGACGAGAGAATAAGTTGGAAAATTTAAGAGAGCTTGTAGGTGGT
GGAAAATCAAGCACCAATATGGCTAAGGGTTCTTCTAGGGACTGGCTTGACCCACACTGCCATGAGGCTGAGTTCGAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCGTCGTCAGTGCGCAAAGCTCCTCCAGCTGAAGAAGATGAGTGGGACACTGATGGGTTCGTGATTCCCAGCTTGGGAATAGAAGAGGCAGACCAAACAAGAGT
TGGTTCTCCAAAAGTAGAAATCGAAGAACCTCCCCCAAAGGTTAAAGAAGAGACGACGATCTATCTTGGCCCACATGGCGCACCACCATCACAGTCAAAACAAGATTTGA
ACCCCACCAATCGTAAGCAACGGTTAAAGCAGAAATTGAAGGAAGCAGACCGGAGGACCACGACAGGACGAGAGAATAAGTTGGAAAATTTAAGAGAGCTTGTAGGTGGT
GGAAAATCAAGCACCAATATGGCTAAGGGTTCTTCTAGGGACTGGCTTGACCCACACTGCCATGAGGCTGAGTTCGAGAAGTAA
Protein sequenceShow/hide protein sequence
MDPSSVRKAPPAEEDEWDTDGFVIPSLGIEEADQTRVGSPKVEIEEPPPKVKEETTIYLGPHGAPPSQSKQDLNPTNRKQRLKQKLKEADRRTTTGRENKLENLRELVGG
GKSSTNMAKGSSRDWLDPHCHEAEFEK