; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy7G008060 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G008060
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrotransposon-like protein 1
Genome locationGy14Chr7:7524485..7525760
RNA-Seq ExpressionCsGy7G008060
SyntenyCsGy7G008060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44005.1 hypothetical protein Csa_018201 [Cucumis sativus]6.55e-144100Show/hide
Query:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
        MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
Subjt:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS

Query:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK
        PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK
Subjt:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK

Query:  EEIILDDAPRTLVVV
        EEIILDDAPRTLVVV
Subjt:  EEIILDDAPRTLVVV

TYK07937.1 uncharacterized protein E5676_scaffold265G00530 [Cucumis melo var. makuwa]5.22e-7284Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE
        MFLLCNALLVFLANYSGLFKSLSSS    PKHLDTNFRFFDFGLDLLQKPSS HSETPEEKKDDA QN P+ EQQ+++ E LGE LFGSETGE+VEMIQ 
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE

Query:  EEEEDEE------NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        EEEED+E      NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EEEEDEE------NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

XP_008462992.1 PREDICTED: uncharacterized protein LOC103501239 [Cucumis melo]7.98e-11684Show/hide
Query:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
        MDQNGVVQFQ +QKTSIGDQKK KPTSH TLKKVTKLLFS+SLFSFF TNLPFHFH+ SSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSS    
Subjt:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS

Query:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQ----------EEEEEDEENCGVMSDEELNR
        PKHLDTNFRFFDFGLDLLQKPSS HSETPEEKKDDA QN P+ EQQ+++ E LGE LFGSETGE+VEMIQ          EEEEE+E NCGVMSDEELNR
Subjt:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQ----------EEEEEDEENCGVMSDEELNR

Query:  KFDEFIKRMKEEIILDDAPRTLVVV
        KFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  KFDEFIKRMKEEIILDDAPRTLVVV

XP_011659727.1 uncharacterized protein LOC105436244 [Cucumis sativus]9.66e-91100Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE
        MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE

Query:  EEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        EEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

XP_038896510.1 uncharacterized protein LOC120084761 [Benincasa hispida]7.33e-5972.79Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNL---EQQQQQAEVLGETLFGSETGELVEM
        MF+LCNALLVFLANYSGLFKSLSSS    PK+ D NFR FDFGLD+L KP  IHSE  EEKKDD  +N PNL   EQ++Q+ ++LGE  FG ETGE+ E+
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNL---EQQQQQAEVLGETLFGSETGELVEM

Query:  IQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        I+EEE   E NCGV+SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  IQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

TrEMBL top hitse value%identityAlignment
A0A0A0K300 Uncharacterized protein3.17e-144100Show/hide
Query:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
        MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
Subjt:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS

Query:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK
        PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK
Subjt:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMK

Query:  EEIILDDAPRTLVVV
        EEIILDDAPRTLVVV
Subjt:  EEIILDDAPRTLVVV

A0A1S3CI71 uncharacterized protein LOC1035012393.86e-11684Show/hide
Query:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS
        MDQNGVVQFQ +QKTSIGDQKK KPTSH TLKKVTKLLFS+SLFSFF TNLPFHFH+ SSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSS    
Subjt:  MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSS

Query:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQ----------EEEEEDEENCGVMSDEELNR
        PKHLDTNFRFFDFGLDLLQKPSS HSETPEEKKDDA QN P+ EQQ+++ E LGE LFGSETGE+VEMIQ          EEEEE+E NCGVMSDEELNR
Subjt:  PKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQ----------EEEEEDEENCGVMSDEELNR

Query:  KFDEFIKRMKEEIILDDAPRTLVVV
        KFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  KFDEFIKRMKEEIILDDAPRTLVVV

A0A5D3C7J6 Uncharacterized protein2.53e-7284Show/hide
Query:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE
        MFLLCNALLVFLANYSGLFKSLSSS    PKHLDTNFRFFDFGLDLLQKPSS HSETPEEKKDDA QN P+ EQQ+++ E LGE LFGSETGE+VEMIQ 
Subjt:  MFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQE

Query:  EEEEDEE------NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        EEEED+E      NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
Subjt:  EEEEDEE------NCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A6J1F6C4 uncharacterized protein LOC1114427422.42e-5254.27Show/hide
Query:  QYQKTSIGDQKKTK-------PTSHQTLKKVTKLLFSISLFSFFI-----TNLPFH-FHVISS---HFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLS
        Q QK ++ +QK  K         + QTLKKVTKLLFS+SLFSF       T LPFH FH   +   HF NQPIDKNSMFLLCNALLVFLANYSGLFKSLS
Subjt:  QYQKTSIGDQKKTK-------PTSHQTLKKVTKLLFSISLFSFFI-----TNLPFH-FHVISS---HFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLS

Query:  SSSSSSPKHLDTNFRFFDFG-------LDLLQKPSSIHSETPEEKKDD-----ALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEE-NCG
        SSS S     D   R +DFG        +L+QKP  I +ET  ++K+D      +  P N E+ +     L    F +ETGE+ +     EEE+EE N G
Subjt:  SSSSSSPKHLDTNFRFFDFG-------LDLLQKPSSIHSETPEEKKDD-----ALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEE-NCG

Query:  VMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
        V+SDEEL RKFDEFIKRMKEEI+LDDA RTLVVV
Subjt:  VMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV

A0A6J1IEZ8 uncharacterized protein LOC1114758272.51e-5056.94Show/hide
Query:  QTLKKVTKLLFSISLFSFFI-----TNLPFH-FHVISS---HFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFG-----
        QTLKKVTKLLFS+SLFSF       T LPFH FH   +   HF NQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSS S     D   R +DFG     
Subjt:  QTLKKVTKLLFSISLFSFFI-----TNLPFH-FHVISS---HFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFG-----

Query:  --LDLLQKPSSIHSETPEEKKDD-----ALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEE-NCGVMSDEELNRKFDEFIKRMKEEIILD
           +L+QKP  I +E   ++K+D      +  P N E+ +     L    F +ETGE+ +      EE+EE N GV+SDEEL RKFDEFIKRMKEEI+LD
Subjt:  --LDLLQKPSSIHSETPEEKKDD-----ALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEE-NCGVMSDEELNRKFDEFIKRMKEEIILD

Query:  DAPRTLVVV
        DA RTLVVV
Subjt:  DAPRTLVVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein4.2e-0425.91Show/hide
Query:  LKKVTKLLFSISLFSF------FITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVF-LANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSS
        +K VTK++   S+FSF       I++L    H++S   ++  +DK  MFLLCN ++ F L ++ G  +SLS   + +           D     L+K  +
Subjt:  LKKVTKLLFSISLFSF------FITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVF-LANYSGLFKSLSSSSSSSPKHLDTNFRFFDFGLDLLQKPSS

Query:  IHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEM-------------IQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEI
        +  E    K+++        E+++    VL   +   E   +VE+             + +  +++E N  ++S E+LN+K ++FI++MK EI
Subjt:  IHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEM-------------IQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEI

AT2G04515.1 unknown protein9.5e-0425.51Show/hide
Query:  QKKTKPTSHQTLKKVTKLLFSISLFSF------FITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVF-LANYSGLFKSLSSSSSSSPKHLDTNFRFFD
        + + +  S + +K VTK++   S+FSF       I++L    H+++   ++  +DK  MFLLCN ++ F L ++ G   SLS   + +           D
Subjt:  QKKTKPTSHQTLKKVTKLLFSISLFSF------FITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVF-LANYSGLFKSLSSSSSSSPKHLDTNFRFFD

Query:  FGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVE-----MIQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEI
             + K  ++  E+   K+++  +   + E++++ A V+ E     + G LV+      + + +++D  N  ++S E+LN+K ++FI++MK EI
Subjt:  FGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVE-----MIQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEI

AT3G13130.1 unknown protein6.8e-1032.83Show/hide
Query:  LKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFG-----LDLLQK-----
        LKK+TK +         +T+  F+ +          +DKN MFLLCN L+V +A  SGL  S S        + D  F + DF      L+L  K     
Subjt:  LKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRFFDFG-----LDLLQK-----

Query:  -PSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVM--SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV
           S  +E    ++D   Q   + E++      L +     E G     I EEE   E N GVM  ++EE+N+KFDEFI++MKEE+ + +A R L++V
Subjt:  -PSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVM--SDEELNRKFDEFIKRMKEEIILDDAPRTLVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAAAATGGAGTAGTTCAATTCCAACAGTACCAAAAGACAAGCATAGGCGATCAAAAGAAGACGAAACCCACCTCTCATCAAACACTAAAGAAGGTAACAAAATT
ACTTTTTTCAATCTCTCTCTTCTCCTTCTTCATCACAAACCTTCCATTTCACTTCCATGTCATCTCTTCCCATTTCTTCAACCAACCAATTGACAAAAACTCCATGTTCC
TCCTTTGTAACGCTCTCCTCGTTTTCCTTGCAAATTACTCCGGTCTCTTCAAATCCCTCTCTTCTTCTTCTTCTTCTTCCCCCAAACATCTCGACACCAATTTCCGATTC
TTCGACTTCGGCCTCGACCTTCTTCAGAAACCCTCATCCATTCACTCTGAAACTCCAGAAGAAAAGAAGGATGACGCACTACAAAACCCACCAAATCTTGAACAACAACA
ACAACAAGCTGAAGTGTTAGGGGAGACTCTTTTTGGAAGTGAAACGGGGGAACTTGTAGAGATGATTCAAGAAGAAGAAGAAGAAGATGAAGAGAATTGTGGAGTGATGA
GTGATGAAGAACTGAATAGAAAGTTTGATGAATTCATCAAAAGAATGAAGGAAGAAATCATCCTAGATGATGCTCCAAGAACTCTAGTCGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAGAGGGTATTAAAGTAAATTCAGTAAAACCCACCAAAAAGAAGTTGAAGGTTCTCTCTATATAAACCAAGCAACCATGTTGCCCATCTCCCATAATAATATCTCCAC
TTTTTCTCACCAACAAAACACACACACACTTCATCCTCCTCCTCCAAATTGATTGAACAAAAAGAAAAAGAAAAAACCAAAACCATGGATCAAAATGGAGTAGTTCAATT
CCAACAGTACCAAAAGACAAGCATAGGCGATCAAAAGAAGACGAAACCCACCTCTCATCAAACACTAAAGAAGGTAACAAAATTACTTTTTTCAATCTCTCTCTTCTCCT
TCTTCATCACAAACCTTCCATTTCACTTCCATGTCATCTCTTCCCATTTCTTCAACCAACCAATTGACAAAAACTCCATGTTCCTCCTTTGTAACGCTCTCCTCGTTTTC
CTTGCAAATTACTCCGGTCTCTTCAAATCCCTCTCTTCTTCTTCTTCTTCTTCCCCCAAACATCTCGACACCAATTTCCGATTCTTCGACTTCGGCCTCGACCTTCTTCA
GAAACCCTCATCCATTCACTCTGAAACTCCAGAAGAAAAGAAGGATGACGCACTACAAAACCCACCAAATCTTGAACAACAACAACAACAAGCTGAAGTGTTAGGGGAGA
CTCTTTTTGGAAGTGAAACGGGGGAACTTGTAGAGATGATTCAAGAAGAAGAAGAAGAAGATGAAGAGAATTGTGGAGTGATGAGTGATGAAGAACTGAATAGAAAGTTT
GATGAATTCATCAAAAGAATGAAGGAAGAAATCATCCTAGATGATGCTCCAAGAACTCTAGTCGTTGTTTGATTATTTATTATTATTATTGTCACTACTTAGTCTTAGGC
TAAATTACAAAAACAAAAACAAAATTAAAATATTTTAAATAAACTTTCTTATTTGTTTTTAAAATATTTTTATTTTTTAAAAAGTTCTGCTCATTTACTTTTGATCTTAG
ACTGTGACGTTGAAGTTCCAAGTCATTGCTACATTGTTTCAAGTACCCATCTTCGTCTAATATTTTGATGAGTTTTTATTCTAATGATGGATTTGAAATATTTCAGAAAG
GTCAAGGTAATTACAACTTTTGAAAAAATAAAGATATATTTTTAACAAACGATAAAGTTTAAAAGAATTATTTTATTTGTAATTTAGCCTTGATTTTATTAAAATTACAA
TGTTAAAAGAGAAAACAAAATAATGATATATGAAATATATGTTTTATCTTCTTATTCATGGTGTAG
Protein sequenceShow/hide protein sequence
MDQNGVVQFQQYQKTSIGDQKKTKPTSHQTLKKVTKLLFSISLFSFFITNLPFHFHVISSHFFNQPIDKNSMFLLCNALLVFLANYSGLFKSLSSSSSSSPKHLDTNFRF
FDFGLDLLQKPSSIHSETPEEKKDDALQNPPNLEQQQQQAEVLGETLFGSETGELVEMIQEEEEEDEENCGVMSDEELNRKFDEFIKRMKEEIILDDAPRTLVVV