CuGenDBv2

Gene ID	CsGy7G008070
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	meiotic recombination protein SPO11-1 isoform X2
Genome location	Gy14Chr7:8132340..8133203
RNA-Seq Expression	CsGy7G008070
Synteny	CsGy7G008070
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0042138 - meiotic DNA double-strand break formation (biological process) GO:0051026 - chiasma assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003918 - DNA topoisomerase type II (ATP-hydrolyzing) activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN44215.2 hypothetical protein Csa_019091 [Cucumis sativus]

1.60e-41

100

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

TYK07934.1 meiotic recombination protein SPO11-1 isoform X2 [Cucumis melo var. makuwa]

6.83e-41

95.89

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

XP_031744432.1 meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus]

3.53e-40

100

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

XP_031744442.1 meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus]

2.87e-40

100

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

XP_031744459.1 meiotic recombination protein SPO11-1-like isoform X2 [Cucumis sativus]

1.20e-42

100

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CI64 meiotic recombination protein SPO11-1 isoform X2

2.15e-39

95.89

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

A0A1S3CJR6 meiotic recombination protein SPO11-1 isoform X1

2.19e-35

90.79

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENW---FNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLEN    FNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENW---FNLSEGKDVLTLQRESHVRRL

A0A1S4E3Z9 meiotic recombination protein SPO11-1 isoform X3

1.17e-35

90.79

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENW---FNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLEN    FNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENW---FNLSEGKDVLTLQRESHVRRL

A0A1S4E415 meiotic recombination protein SPO11-1 isoform X4

1.08e-39

95.89

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

A0A5D3C9M3 Meiotic recombination protein SPO11-1 isoform X2

3.31e-41

95.89

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL
        MEGNRGSLERIEV+RKITELTRSMIVELSNGSS+MIAIDRFKSYC+NSLENWFNLSEGKDVLTLQRESHVRRL
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRL

SwissProt top hits

e value

%identity

Alignment

Q9M4A2 Meiotic recombination protein SPO11-1

3.2e-04

30.26

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSE---GKDVLTLQRESHVRRL
        MEG     E   ++++I + T+S++V+L+ G S  I+I++F++YC N   +    S+   G+++ TL++E    R+
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSE---GKDVLTLQRESHVRRL

Arabidopsis top hits

e value

%identity

Alignment

AT3G13170.1 Spo11/DNA topoisomerase VI, subunit A protein

2.2e-05

30.26

Show/hide

Query:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSE---GKDVLTLQRESHVRRL
        MEG     E   ++++I + T+S++V+L+ G S  I+I++F++YC N   +    S+   G+++ TL++E    R+
Subjt:  MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSE---GKDVLTLQRESHVRRL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGGAAACCGAGGAAGCTTGGAGAGAATTGAAGTAATGAGAAAAATCACAGAGCTAACGAGATCTATGATCGTCGAACTGAGCAATGGAAGCTCCAGGATGATCGC
CATCGATCGATTCAAAAGTTACTGCTCCAATTCCCTTGAAAACTGGTTCAATTTATCTGAAGGGAAGGATGTTCTAACACTTCAAAGGGAAAGCCACGTCCGTAGACTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEGNRGSLERIEVMRKITELTRSMIVELSNGSSRMIAIDRFKSYCSNSLENWFNLSEGKDVLTLQRESHVRRLX

CsGy7G008070 (gene) of Cucumber (Gy14) v2.1 genome