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CsGy7G010930 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G010930
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionprotein RADIALIS-like 1
Genome locationGy14Chr7:13809772..13810349
RNA-Seq ExpressionCsGy7G010930
SyntenyCsGy7G010930
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR044636 - Transcription factor RADIALIS-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036174.1 protein RADIALIS-like 2 [Cucumis melo var. makuwa]1.13e-5496.55Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWTKMQNKTFE ALAEYDQDTPERWVNVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPYPTTSS+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

XP_008447294.1 PREDICTED: protein RADIALIS-like 2 [Cucumis melo]1.13e-5496.55Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWTKMQNKTFE ALAEYDQDTPERWVNVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPYPTTSS+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

XP_011659078.1 protein RADIALIS-like 2 [Cucumis sativus]2.70e-57100Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

XP_022952273.1 protein RADIALIS-like 1 [Cucurbita moschata]4.10e-4586.21Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSS GSNAWT MQNK FE ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPY   +S+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

XP_038888638.1 protein RADIALIS-like 1 [Benincasa hispida]2.11e-4789.66Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWT MQNKTFE ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLL DVKHIESGNVPFPYP  SS+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

TrEMBL top hitse value%identityAlignment
A0A1S3BHZ4 protein RADIALIS-like 25.46e-5596.55Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWTKMQNKTFE ALAEYDQDTPERWVNVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPYPTTSS+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

A0A5D3D8F6 Protein RADIALIS-like 25.46e-5596.55Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSSHGSNAWTKMQNKTFE ALAEYDQDTPERWVNVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPYPTTSS+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

A0A6J1C6U4 protein RADIALIS-like 11.89e-4180.46Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSS GS+AWT MQNK FE ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLL+ DVKHIESG+VPFPY T S++DD P KRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

A0A6J1GK35 protein RADIALIS-like 11.98e-4586.21Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSS GSNAWT MQNK FE ALA YDQDTPERW+NVAKAVGEKTEEEVK HYQLLLHDVKHIESGNVPFPY   +S+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

A0A6J1I517 protein RADIALIS-like 18.08e-4585.06Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG
        MASMSS GSNAWT MQNK FE ALA YDQDTPERW+NVAK VGEKTEEEVK HYQLLLHDVKHIESGNVPFPY   +S+DDLPRKRG
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRG

SwissProt top hitse value%identityAlignment
F4JVB8 Protein RADIALIS-like 15.9e-2164.47Show/hide
Query:  ASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTS
        +SMSS  S +WT  QNK FE ALA YDQDTP RW NVAK VG KT EEVK HY+LL+ D+  IE+G+VPFP   TS
Subjt:  ASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTS

Q1A173 Protein RADIALIS-like 68.0e-1860Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN
        MAS S    + WT  QNK FE ALA YD+DTP+RW NVAKAVG KT EEVK HY +L+ D+ +IE+G VP P Y T  SN
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN

Q58FS3 Transcription factor RADIALIS1.2e-1855.17Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKR
        MAS    G   W+  +NK FE ALA YD+DTP+RW NVA+AV  +T EEVK HY++L+ D+K+IESG VPFP Y TT  N     KR
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKR

Q6NNN0 Protein RADIALIS-like 32.7e-1856.25Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSND
        MAS S   S +WT+ +NK FE ALA YDQDTP+RW NVA+AVG K+ EEV+ HY+LL+ DV  IESG  P P   ++ N+
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSND

Q9SIJ5 Protein RADIALIS-like 27.0e-2259.09Show/hide
Query:  SMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKRGDD
        SMSS+GS +WT  QNK FE ALA YDQDTP+RW NVA+AVG KT EE K  Y LL+ D++ IE+G+VPFP Y TT+ N +  R R ++
Subjt:  SMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKRGDD

Arabidopsis top hitse value%identityAlignment
AT1G19510.1 RAD-like 51.6e-1859.72Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP
        MAS S   S++WT  QNK FE ALA YD+DTP+RW NVAKAVG K+ EEVK HY +L+ D+ +IE   VP P
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP

AT1G75250.1 RAD-like 65.7e-1960Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN
        MAS S    + WT  QNK FE ALA YD+DTP+RW NVAKAVG KT EEVK HY +L+ D+ +IE+G VP P Y T  SN
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN

AT1G75250.2 RAD-like 65.7e-1960Show/hide
Query:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN
        MAS S    + WT  QNK FE ALA YD+DTP+RW NVAKAVG KT EEVK HY +L+ D+ +IE+G VP P Y T  SN
Subjt:  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSN

AT2G21650.1 Homeodomain-like superfamily protein5.0e-2359.09Show/hide
Query:  SMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKRGDD
        SMSS+GS +WT  QNK FE ALA YDQDTP+RW NVA+AVG KT EE K  Y LL+ D++ IE+G+VPFP Y TT+ N +  R R ++
Subjt:  SMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFP-YPTTSSNDDLPRKRGDD

AT4G39250.1 RAD-like 14.2e-2264.47Show/hide
Query:  ASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTS
        +SMSS  S +WT  QNK FE ALA YDQDTP RW NVAK VG KT EEVK HY+LL+ D+  IE+G+VPFP   TS
Subjt:  ASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAATGTCCTCTCATGGCTCAAATGCATGGACTAAAATGCAAAACAAGACATTTGAAATGGCTTTGGCTGAATATGATCAAGACACTCCTGAACGATGGGTGAA
TGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGATGCATTACCAACTTCTCCTTCATGATGTCAAACATATTGAGTCTGGCAATGTCCCTTTTCCCTATC
CAACGACATCGAGCAATGATGATTTGCCAAGGAAACGAGGTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAATGTCCTCTCATGGCTCAAATGCATGGACTAAAATGCAAAACAAGACATTTGAAATGGCTTTGGCTGAATATGATCAAGACACTCCTGAACGATGGGTGAA
TGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGATGCATTACCAACTTCTCCTTCATGATGTCAAACATATTGAGTCTGGCAATGTCCCTTTTCCCTATC
CAACGACATCGAGCAATGATGATTTGCCAAGGAAACGAGGTGATGATTAA
Protein sequenceShow/hide protein sequence
MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHDVKHIESGNVPFPYPTTSSNDDLPRKRGDD