CuGenDBv2

Gene ID	CsGy7G011630
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein S18
Genome location	Gy14Chr7:14681336..14689209
RNA-Seq Expression	CsGy7G011630
Synteny	CsGy7G011630
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005829 - cytosol (cellular component) GO:0015935 - small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001892 - Ribosomal protein S13 IPR010979 - Ribosomal protein S13-like, H2TH IPR027437 - 30s ribosomal protein S13, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0059528.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa]

1.66e-77

100

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

XP_002524340.1 40S ribosomal protein S18 [Ricinus communis]

1.13e-77

99.15

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

XP_004139687.1 40S ribosomal protein S18 [Cucumis sativus]

7.96e-78

100

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

XP_021689481.1 40S ribosomal protein S18-like [Hevea brasiliensis]

3.65e-78

99.15

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

XP_021902783.1 40S ribosomal protein S18 isoform X1 [Carica papaya]

1.61e-77

98.31

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKG+GRRFANIVCKKADVDMNKRAGELTAAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7Z7 Uncharacterized protein

3.85e-78

100

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

A0A1S3CH47 40S ribosomal protein S18

3.85e-78

100

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

A0A2C9WFF5 Uncharacterized protein

5.47e-78

99.15

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

A0A5A7UWI6 40S ribosomal protein S18 isoform X1

8.04e-78

100

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

B9SEC1 40S ribosomal protein S18, putative

5.47e-78

99.15

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

SwissProt top hits

e value

%identity

Alignment

P34788 40S ribosomal protein S18

7.2e-59

94.92

Show/hide

Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Q8ISP0 40S ribosomal protein S18

3.7e-47

73.73

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLV  E FQHILRV+NTN+DG++KIMFALTSIKG+GRR++NIVCKKAD+D++KRAGEL+  E++ L+ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        N+LD KLR+DLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Q8IT98 40S ribosomal protein S18

1.8e-46

72.03

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        M+L+  E FQHILRV+NTN+DGK+KIMFA+T+IKG+GRR+AN+VCKKADVD+ KRAGEL+  E++ ++ +++NPRQ+KIP+WFLNRQKD KDGKYSQV+S
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALD KLR+DLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Q8JGS9 40S ribosomal protein S18

7.8e-45

70.34

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLV  E FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D+NKRAGELT  E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        N LD KLR+DLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Q90YQ5 40S ribosomal protein S18

2.9e-44

69.49

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Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLV  E FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D++KRAGELT  E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        N LD KLR+DLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Arabidopsis top hits

e value

%identity

Alignment

AT1G22780.1 Ribosomal protein S13/S18 family

5.1e-60

94.92

Show/hide

Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

AT1G34030.1 Ribosomal protein S13/S18 family

5.1e-60

94.92

Show/hide

Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

AT4G09800.1 S18 ribosomal protein

5.1e-60

94.92

Show/hide

Query:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS
        MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVS
Subjt:  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVS

Query:  NALDMKLRDDLERLKKIR
        NALDMKLRDDLERLKKIR
Subjt:  NALDMKLRDDLERLKKIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCACTGGTAGCAAACGAGGATTTTCAGCACATCCTGCGTGTGCTCAACACCAACGTCGATGGGAAGCAAAAGATTATGTTTGCTCTTACTTCAATTAAAGGT
ATTGGAAGACGTTTCGCTAACATCGTTTGTAAGAAGGCTGATGTCGACATGAACAAGAGGGCCGGTGAACTAACTGCTGCTGAGTTGGATAATCTCATGGTGGTT
GTTGCCAATCCACGACAATTTAAAATTCCCGACTGGTTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATG
AAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGTAA

mRNA sequence

Show/hide mRNA sequence

GTTTGAGGAGGGTATATTGGTCAATTTAGTTTAGTCAGAAACCCTAGAATCTGATTGACAATATATAAAATCCTTCTCCACTCCCCACTTGAAGATCTCCTCCTC
TGCTTCTTTCCTGCCTTTGCGCCGCCGGGGATTCAACCAACTCCTTGCCTCTATCTTCATCCGCCATGTCACTGGTAGCAAACGAGGATTTTCAGCACATCCTGC
GTGTGCTCAACACCAACGTCGATGGGAAGCAAAAGATTATGTTTGCTCTTACTTCAATTAAAGGTATTGGAAGACGTTTCGCTAACATCGTTTGTAAGAAGGCTG
ATGTCGACATGAACAAGAGGGCCGGTGAACTAACTGCTGCTGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTTAAAATTCCCGACTGGTTTT
TGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGT
AATATGCTTGAAGTGTTTCTGCTAATGGATGATGTATTTTGTTTATTGGATATTGAGTCCCACTCCTTGCATTATGTAAATTCATAGTTCACATCGATTAATCAT
TTTGACATGATGAATTCAGGAACCACCGAGGTCTGAGGCACTACTGGGGCCTCCGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGCCGAGGGAAAACTGTTG
GTGTCTCCAAGAAGCGTTGAGCATTTGCTTGTTTCTATAGTCGAGTTAAGTATGTGTTTGGGCAAATCAAGTTCTTTGGCCTTTTTAGTTGAACATTCGAGCTGT
TCTTTCCTTTTGGAATTTTTGTTTGAGATGTGGTATTTTTGTTCAATCTTTTTTTCTACTGACTTTAATTAGGCTGGAAAAGGAAGGTTGATAGTGACAAATGGT
AAAGATTATGAATCCATATTGATCCTTTTGGTGTGAAAAGGTGTTAAGAGTGCCAGTTTAATAATAGGGTTGAGAAATCATCTTATTGTTGATTTTCGAATAATG
TGTTATTTTTCTAA

Protein sequence

Show/hide protein sequence

MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDM
KLRDDLERLKKIR

CsGy7G011630 (gene) of Cucumber (Gy14) v2.1 genome