CuGenDBv2

Gene ID	CsGy7G013945
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type E3 ubiquitin transferase
Genome location	Gy14Chr7:18014579..18015206
RNA-Seq Expression	CsGy7G013945
Synteny	CsGy7G013945
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8646283.1 hypothetical protein Csa_016522 [Cucumis sativus]

3.64e-66

100

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
        MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW

Query:  KL
        KL
Subjt:  KL

XP_011659248.2 uncharacterized protein LOC101202866 isoform X1 [Cucumis sativus]

1.20e-64

100

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
        MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW

Query:  KL
        KL
Subjt:  KL

XP_011659249.2 uncharacterized protein LOC101202866 isoform X2 [Cucumis sativus]

1.06e-64

100

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
        MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSW

Query:  KL
        KL
Subjt:  KL

XP_038897884.1 U-box domain-containing protein 3 isoform X2 [Benincasa hispida]

2.45e-43

86.32

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCL NSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLK+VLDDVI+LKLSSDELLY ECESLDAAV EAREFIE WC KT+K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

XP_038897885.1 U-box domain-containing protein 3 isoform X3 [Benincasa hispida]

2.34e-43

86.32

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCL NSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLK+VLDDVI+LKLSSDELLY ECESLDAAV EAREFIE WC KT+K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K726 RING-type E3 ubiquitin transferase

1.95e-43

85.26

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCL NSISRFIHLVSCHTTKPLPLPKKC+NLVVVLKLLKVVLDDVI+LKLSSDELLY ECESLDAAV EAREF+E WC KT+K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

A0A1S3BS34 RING-type E3 ubiquitin transferase

6.98e-43

85.26

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCL NSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVI+LKLSSDEL Y ECESLD AV EAREFIE WC KT+K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

A0A5D3C862 RING-type E3 ubiquitin transferase

6.92e-43

85.26

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCL NSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVI+LKLSSDEL Y ECESLD AV EAREFIE WC KT+K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

A0A6J1H5W7 RING-type E3 ubiquitin transferase

1.83e-39

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCLINSISRFIHLVSCHTTK LPLPK C+NL VVLK LK+VLDDVI+LKLSSDELLYRECESLD AV +AREFIE WC K +K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

A0A6J1H675 RING-type E3 ubiquitin transferase

1.93e-39

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE
        MGTASVQCLINSISRFIHLVSCHTTK LPLPK C+NL VVLK LK+VLDDVI+LKLSSDELLYRECESLD AV +AREFIE WC K +K    L+
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLE

SwissProt top hits

e value

%identity

Alignment

Q8GWV5 U-box domain-containing protein 3

2.0e-17

48.31

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK
        M    V+CL+NSISR++HLV+C T +  P+     N+V++LKLLK +LD+V++ K+ SD+ LY+ CE LD+ V +AREF+E W  K +K
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK

Arabidopsis top hits

e value

%identity

Alignment

AT3G54790.1 ARM repeat superfamily protein

1.4e-18

48.31

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Query:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK
        M    V+CL+NSISR++HLV+C T +  P+     N+V++LKLLK +LD+V++ K+ SD+ LY+ CE LD+ V +AREF+E W  K +K
Subjt:  MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK

AT3G54790.2 ARM repeat superfamily protein

4.7e-09

50.94

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Query:  LVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK
        +V++LKLLK +LD+V++ K+ SD+ LY+ CE LD+ V +AREF+E W  K +K
Subjt:  LVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAK

Sequences

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CDS sequence

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ATGGGAACAGCCTCTGTGCAATGTCTGATTAACAGTATTTCCAGATTCATTCATCTAGTTTCATGCCACACTACAAAGCCTTTGCCTCTTCCCAAGAAATGCAGAAATCT
CGTTGTTGTCTTAAAACTTCTGAAAGTCGTCCTTGATGATGTCATTAACCTCAAACTCTCTTCAGATGAGTTACTTTATCGTGAATGTGAGTCACTGGATGCAGCTGTAT
ATGAAGCTCGAGAATTCATCGAAAAATGGTGTCTGAAGACAGCAAAATTTACAAAATGTCTTGAAGGCCTTCAATCATGGAAGCTATGA

mRNA sequence

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Protein sequence

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MGTASVQCLINSISRFIHLVSCHTTKPLPLPKKCRNLVVVLKLLKVVLDDVINLKLSSDELLYRECESLDAAVYEAREFIEKWCLKTAKFTKCLEGLQSWKL

CsGy7G013945 (gene) of Cucumber (Gy14) v2.1 genome