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CsGy7G017970 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G017970
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationGy14Chr7:21132396..21134624
RNA-Seq ExpressionCsGy7G017970
SyntenyCsGy7G017970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575660.1 hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia]1.04e-4976.56Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+FAAPPS+LNLTSR S IH A LPS IA IQ+HSNA P PSFRYR N  GLELRQRS  I AS S+D NSIKEEN SSKASSD AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLISAK
        FV SL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLISAK

XP_011659472.1 uncharacterized protein LOC101220885 [Cucumis sativus]1.56e-76100Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
        MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV

Query:  LSLILWIFSSAVTSLLGLVVKLISAK
        LSLILWIFSSAVTSLLGLVVKLISAK
Subjt:  LSLILWIFSSAVTSLLGLVVKLISAK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]1.80e-5076.56Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+F+APPS+LNLTSR S IH A LPS IA IQ+HSNA P PSFRYR N  GLELRQRS  I AS S+DGNSIKEEN SSKASSD AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLISAK
        FV SL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLISAK

XP_022991945.1 uncharacterized protein LOC111488436 [Cucurbita maxima]1.36e-4775.4Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+FAAPPS+LNLTSR S IH A LPS IA IQ+HSNA P PSFRYR N  GLEL  RS  I AS S+DGNSI+EEN SSKASSD AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLIS
        FV SL+LW+ SSA TSL+GLVVKLIS
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLIS

XP_038899532.1 uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]4.42e-5178.12Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+FAAP  +LNLTSR S IHRA LPS I +IQFHSNASPFPSFRYR N  GLELRQRS  I AS S+DGNSIKEEN SSKAS+D AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLISAK
        FV SL+LWIFSS VTS L LVVKLIS K
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLISAK

TrEMBL top hitse value%identityAlignment
A0A0A0K9W1 Uncharacterized protein7.55e-77100Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
        MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV

Query:  LSLILWIFSSAVTSLLGLVVKLISAK
        LSLILWIFSSAVTSLLGLVVKLISAK
Subjt:  LSLILWIFSSAVTSLLGLVVKLISAK

A0A5A7UVF6 Uncharacterized protein9.78e-4288.64Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
        MAS+F APPSQLNLTSRRS  HRA LPS IASIQF SNASPF SF  RKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG

A0A6J1GPL5 uncharacterized protein LOC1114559848.71e-5176.56Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+F+APPS+LNLTSR S IH A LPS IA IQ+HSNA P PSFRYR N  GLELRQRS  I AS S+DGNSIKEEN SSKASSD AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLISAK
        FV SL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLISAK

A0A6J1JUC2 uncharacterized protein LOC1114884366.59e-4875.4Show/hide
Query:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MAS+FAAPPS+LNLTSR S IH A LPS IA IQ+HSNA P PSFRYR N  GLEL  RS  I AS S+DGNSI+EEN SSKASSD AQGPPFLTILAG 
Subjt:  MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVLSLILWIFSSAVTSLLGLVVKLIS
        FV SL+LW+ SSA TSL+GLVVKLIS
Subjt:  FVLSLILWIFSSAVTSLLGLVVKLIS

A0A6J1KVQ7 uncharacterized protein LOC1114980251.01e-4268.99Show/hide
Query:  MASVFAAPPSQLNLTSRRSSI-HRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAG
        MASVFAAPPSQL L+S R S+ H+AFLPS I  ++FH N  P PSFRY KN  GL+LRQRS  I AS S+DGNS KEEN  SK + D AQGPPFLTILAG
Subjt:  MASVFAAPPSQLNLTSRRSSI-HRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAG

Query:  FFVLSLILWIFSSAVTSLLGLVVKLISAK
        FFV SL+LWI SS+VT+L+ LVVKLIS K
Subjt:  FFVLSLILWIFSSAVTSLLGLVVKLISAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTCGATTCACCGAGCCTTTCTTCCTTCTTACATTGCCAGCATTCAATTTCACTC
GAACGCCTCTCCATTTCCTTCTTTCAGGTACAGGAAGAACATCATTGGATTAGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATTCCATCAAGG
AGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCCAAGGTCCTCCATTTCTTACCATTTTAGCTGGATTTTTTGTCTTATCCCTTATACTATGGATATTCAGTTCT
GCTGTTACGTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAA
mRNA sequenceShow/hide mRNA sequence
TTATTTCCATCATCGTTGATACAATATGATTGGATGATATGATATGTTATTTTATTGGTCATAAAATAATCATATTCATTATGAAGTTACGAAATTCAAAACAAATGTGT
ATTAAAAAATGAAAATATTGGTATGATAAGAAAATGACACGTAGATTACGAACGGAAGAAGCACCAACCACTCACTCTTTGTGTCCGGAGGCTCCAAAGTTTTTGTATTA
CGACTAAGTCACTGACGGTGAAGAATGGCTTCCGTCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTCGATTCACCGAGCCTTTCTTCCTTCTTA
CATTGCCAGCATTCAATTTCACTCGAACGCCTCTCCATTTCCTTCTTTCAGGTACAGGAAGAACATCATTGGATTAGAATTAAGGCAAAGATCTATAGCAGCCTCAAAAT
CCACAGATGGGAATTCCATCAAGGAGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCCAAGGTCCTCCATTTCTTACCATTTTAGCTGGATTTTTTGTCTTATCC
CTTATACTATGGATATTCAGTTCTGCTGTTACGTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAATGTCGCATAATTGGAATAGTTTCATGTTTCTAAGC
ATAAATCTGTATGGTTATATTTGTAGCAAAACTTACTTTTTAGCCAGTTTTAGCTTTATTTGTAGTGAATAGATTTTGTTTTCATCTTATTTATGCCCTA
Protein sequenceShow/hide protein sequence
MASVFAAPPSQLNLTSRRSSIHRAFLPSYIASIQFHSNASPFPSFRYRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFVLSLILWIFSS
AVTSLLGLVVKLISAK