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CsGy7G018613 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G018613
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionpentatricopeptide repeat-containing protein At4g02750-like
Genome locationGy14Chr7:21566693..21566977
RNA-Seq ExpressionCsGy7G018613
SyntenyCsGy7G018613
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7997284.1 hypothetical protein FH972_001931 [Carpinus fangiana]1.55e-0575.86Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        +NSCLSVCNALITMYFKCGS +G+ VF++
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
KGN45241.1 hypothetical protein Csa_016465 [Cucumis sativus]1.00e-66100Show/hide
Query:  MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
        MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
Subjt:  MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
XP_022148556.1 pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia]1.14e-0582.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNALITMYFKCGS EG+SVF +
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
XP_022960219.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata]1.56e-0582.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNA+ITMYFKCGS EGISVF +
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
XP_023004730.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima]8.35e-0682.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNA+ITMYFKCGS EGISVF++
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
TrEMBL top hitse value%identityAlignment
A0A0A0KBR5 Uncharacterized protein4.85e-67100Show/hide
Query:  MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
        MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
Subjt:  MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT
A0A5N6QFX9 DYW_deaminase domain-containing protein7.52e-0675.86Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        +NSCLSVCNALITMYFKCGS +G+ VF++
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
A0A6J1D5R5 pentatricopeptide repeat-containing protein At4g02750-like5.52e-0682.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNALITMYFKCGS EG+SVF +
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
A0A6J1HAB1 pentatricopeptide repeat-containing protein At4g02750-like7.55e-0682.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNA+ITMYFKCGS EGISVF +
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
A0A6J1KVF3 pentatricopeptide repeat-containing protein At4g02750-like4.04e-0682.76Show/hide
Query:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
        LNSCL VCNA+ITMYFKCGS EGISVF++
Subjt:  LNSCLSVCNALITMYFKCGSQEGISVFDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGCCAAGTGTGAGGATGTTGCGTTCAAATTGTTTGGTGTCATGCTTTCGAATCGAAGATTTCCCCCCTCCTTTTCTGCATGTGCATCCCTTGGCACTA
CTAAAAGCTTGGGGAACAAATTCATGCGTTGACATACAAAGTTCACTCAATTCTTGTCTATCTGTATGTAATGCTCTGATAACAATGTATTTCAAATGTGGCAGT
CAAGAAGGCATTTCTGTGTTCGATCAGTCGAGACATAATTACCTGGAAAGCAGTTTTAGTTGGCTGTGCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGCCAAGTGTGAGGATGTTGCGTTCAAATTGTTTGGTGTCATGCTTTCGAATCGAAGATTTCCCCCCTCCTTTTCTGCATGTGCATCCCTTGGCACTA
CTAAAAGCTTGGGGAACAAATTCATGCGTTGACATACAAAGTTCACTCAATTCTTGTCTATCTGTATGTAATGCTCTGATAACAATGTATTTCAAATGTGGCAGT
CAAGAAGGCATTTCTGTGTTCGATCAGTCGAGACATAATTACCTGGAAAGCAGTTTTAGTTGGCTGTGCACATAA
Protein sequenceShow/hide protein sequence
MDKPSVRMLRSNCLVSCFRIEDFPPPFLHVHPLALLKAWGTNSCVDIQSSLNSCLSVCNALITMYFKCGSQEGISVFDQSRHNYLESSFSWLCT