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CsGy7G018617 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy7G018617
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationGy14Chr7:21567288..21567581
RNA-Seq ExpressionCsGy7G018617
SyntenyCsGy7G018617
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593380.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.17e-1080Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CRVHYFLTKDD HD+IE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.19e-1080Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CRVHYFLTKDD HD+IE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
KGN45242.1 hypothetical protein Csa_015822 [Cucumis sativus]1.84e-68100Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
        MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
XP_022960219.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata]4.34e-1077.14Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CR+HYFLTKDD HD+IE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
XP_023515085.1 pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo]4.34e-1077.14Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CR+HYFLTKDD HD+IE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
TrEMBL top hitse value%identityAlignment
A0A0A0KA26 Uncharacterized protein8.91e-69100Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
        MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS
A0A5N5G813 Pentatricopeptide repeat-containing protein6.94e-0768.57Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MKD+GV KEPG SWIQMK +VHYFL  D  HD I+
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
A0A6J1D5R5 pentatricopeptide repeat-containing protein At4g02750-like3.07e-0858.7Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVK
        M +KGV KEPG+SWIQ+K RVH+FLTKDD HD+I      L+ ++K
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVK
A0A6J1HAB1 pentatricopeptide repeat-containing protein At4g02750-like2.10e-1077.14Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CR+HYFLTKDD HD+IE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
A0A6J1KVF3 pentatricopeptide repeat-containing protein At4g02750-like1.36e-0971.43Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
        MK+K VAKEPG SWIQ++CR+HYF+TKDD HD+I+
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-0429.73Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFC
        MK+ G+  + G SW+++K +VH FL+ D  H + +  + +LEG  +      L +I    S+   +I     FC
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFC
AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0441.3Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVK
        M+D+GV KE   SWI+M+ +VH FL  D  H + E     L+ + K
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVK
AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-0444.12Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKI
        M+D+G+ KEPG SWI++  ++H F+  D+ H +I
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKI
AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-0447.62Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLE
        MK++GV KEPG SWI+    VH F+  D  H + E  S  LE
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLE
AT5G39680.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-0450Show/hide
Query:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKI
        M ++GV KEPGVSWI ++ + H FL +D+ H +I
Subjt:  MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATGAAGTGCAGGGTACACTACTTTCTTACCAAGGACGATTGTCATGACAAGATTGAA
GGTGATTCATTCATGCTTGAAGGAGTTGTTAAAACATCTCACCATGGCAGGTTATGTCAGATACAAATTTTATGCTCCATAATGTGGAAGAAGATTAAAAACAAA
ATAAGCTTCTGTACCATTGTGAGAAGCTTGCCGTTGCTTATGGGATCTTGCACACACCAAACAAGATGCCAATTGAAATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATTCAGATGAAGTGCAGGGTACACTACTTTCTTACCAAGGACGATTGTCATGACAAGATTGAA
GGTGATTCATTCATGCTTGAAGGAGTTGTTAAAACATCTCACCATGGCAGGTTATGTCAGATACAAATTTTATGCTCCATAATGTGGAAGAAGATTAAAAACAAA
ATAAGCTTCTGTACCATTGTGAGAAGCTTGCCGTTGCTTATGGGATCTTGCACACACCAAACAAGATGCCAATTGAAATCATGA
Protein sequenceShow/hide protein sequence
MKDKGVAKEPGVSWIQMKCRVHYFLTKDDCHDKIEGDSFMLEGVVKTSHHGRLCQIQILCSIMWKKIKNKISFCTIVRSLPLLMGSCTHQTRCQLKS