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CsaV3_3G007780 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G007780
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptioneukaryotic translation initiation factor 5B
Genome locationchr3:6797930..6807636
RNA-Seq ExpressionCsaV3_3G007780
SyntenyCsaV3_3G007780
Gene Ontology termsGO:0001763 - morphogenesis of a branching structure (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011650662.1 uncharacterized protein LOC105434808 [Cucumis sativus]9.9e-82100Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDEL
        MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDEL
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDEL

Query:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLLCWF
        IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLLCWF
Subjt:  IPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLLCWF

XP_016898944.1 PREDICTED: uncharacterized protein LOC103483155 [Cucumis melo]1.3e-5288.52Show/hide
Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N DIIIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRQRVTLADLL
        V+AIQRHVAQRIR+RVTLADLL
Subjt:  VLAIQRHVAQRIRQRVTLADLL

XP_023521995.1 bystin-like, partial [Cucurbita pepo subsp. pepo]2.2e-4167.52Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNWVH+ FHY PLK     RKK ESI KEAK QG LA+QVDE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KEGK D  D    D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL
        D+D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+R+VAQR+R+RVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL

XP_023540247.1 uncharacterized protein LOC111800673 [Cucurbita pepo subsp. pepo]1.2e-4268.79Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNWVH+ FHY PLK    SRKK ESITKEAK QG LA+QVDE V   DDWRI NGRRLTIFFMGF+KSSK+      YFNL KEGKRD    I+ D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL
        D+D+D+L PLM+TTF NNFDD NGEFCT+F+KS+VV+AI+RHVA R+R+RVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL

XP_038903821.1 protein TILLER ANGLE CONTROL 1-like [Benincasa hispida]5.1e-6282.35Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDN--GDIIIVDNAEDEDD-
        MFNWVHTKFHYNPLK GN SRKKGESI K  KTQGLL +QVDEFVDDW+INNGRRLTI FMGFEKSSK + YFNLRKEGKRDN   DIIIVDN  DE+D 
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDN--GDIIIVDNAEDEDD-

Query:  -DELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADL
         DEL PLM+TTFQ NFD++NGEFCTEFEKSQVV+AIQRHVAQRIR+RVTLADL
Subjt:  -DELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADL

TrEMBL top hitse value%identityAlignment
A0A1S4DSI3 uncharacterized protein LOC1034831556.1e-5388.52Show/hide
Query:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV
        +  KTQGLLA+QVDEFVDDWRIN+GRR TIFFMGFEK+SKTKTY NLRKEGKR+N DIIIVDNA DEDDDELIPLMSTTFQNNFDD+NGEFCTEFEKSQV
Subjt:  KEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQV

Query:  VLAIQRHVAQRIRQRVTLADLL
        V+AIQRHVAQRIR+RVTLADLL
Subjt:  VLAIQRHVAQRIRQRVTLADLL

A0A6J1D0S4 uncharacterized protein LOC1110162442.9e-2352.76Show/hide
Query:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNW+H+ FHYNPLK     N  RK  +S+ K         +++ + ++DWRI NGRRLTI  +GFE+SSK +     Y NL+KEGKR   D ++ D+  
Subjt:  MFNWVHTKFHYNPLK---DGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFC
        D+DDDEL PLM+TTFQNNFDDS GEFC
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFC

A0A6J1EIR9 uncharacterized protein LOC1114343431.5e-3866.88Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNWVH+ FHY PLK     RKK  SI KEAK QG L++QVDE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KEGK+D  D    DN  
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL
        D D+D L PLM+TTF NNFDD NGEFCTEF+KS+VV+AI+RHVA R+R+RVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL

A0A6J1ICK1 uncharacterized protein LOC1114736217.7e-4064.97Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QG LA+Q+DE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KE KRD   I+  D+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+R+RVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL

A0A6J1ICL7 uncharacterized protein LOC1114744065.0e-3965.61Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE
        MFNWVH+ FHY PLK     RKK ES+ KEAK QG LA+Q+DE V   DDWRI NGRRLTIFFMGF+KSSK++     YFNL KE KRD     IVD+ +
Subjt:  MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFV---DDWRINNGRRLTIFFMGFEKSSKTKT----YFNLRKEGKRDNGDIIIVDNAE

Query:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL
        D+D+D L  LM+TTF NNFDD NGEFCTEF+KS+VV+AI+R++AQR+R+RVTLADLL
Subjt:  DEDDDELIPLMSTTFQNNFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLL

SwissProt top hitse value%identityAlignment
U3MMQ4 Protein TILLER ANGLE CONTROL 12.4e-0632.89Show/hide
Query:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDIIIVDN
        +FNWVH + H   +KDG     KK E  T +  TQ  L +     VD  +D WR      LTI   GF+    S+    YF L  +E  +++       N
Subjt:  MFNWVHTKFHYNPLKDGNTSR-KKGESITKEAKTQGLLAE----QVDEFVDDWRINNGRRLTIFFMGFE---KSSKTKTYFNLR-KEGKRDNGDIIIVDN

Query:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI
         +D+DDD          EL PLM TTF+++F+D    F    +K + V+L +
Subjt:  AEDEDDD----------ELIPLMSTTFQNNFDDSNGEFCTEFEK-SQVVLAI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAACACAAGGATTATT
AGCAGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACCAAAACTTATTTCA
ATTTGAGGAAGGAGGGAAAGAGAGATAATGGAGATATTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGACCACATTTCAGAAC
AACTTTGACGATAGTAATGGTGAATTTTGTACGGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCAGAGAGTCACGCTGGC
GGACCTGCTTTGTTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAACTGGGTTCACACGAAGTTCCACTACAACCCTCTTAAAGATGGAAATACGTCAAGAAAGAAGGGCGAATCTATCACGAAGGAGGCAAAAACACAAGGATTATT
AGCAGAACAAGTCGATGAATTTGTTGATGATTGGAGGATCAACAATGGCCGCCGTCTTACCATTTTCTTTATGGGATTTGAGAAGTCATCAAAAACCAAAACTTATTTCA
ATTTGAGGAAGGAGGGAAAGAGAGATAATGGAGATATTATTATTGTTGATAATGCTGAGGACGAGGATGATGATGAGTTGATCCCATTAATGTCGACCACATTTCAGAAC
AACTTTGACGATAGTAATGGTGAATTTTGTACGGAATTCGAGAAGTCTCAAGTAGTCTTGGCTATTCAACGACATGTCGCTCAAAGAATCCGCCAGAGAGTCACGCTGGC
GGACCTGCTTTGTTGGTTTTAA
Protein sequenceShow/hide protein sequence
MFNWVHTKFHYNPLKDGNTSRKKGESITKEAKTQGLLAEQVDEFVDDWRINNGRRLTIFFMGFEKSSKTKTYFNLRKEGKRDNGDIIIVDNAEDEDDDELIPLMSTTFQN
NFDDSNGEFCTEFEKSQVVLAIQRHVAQRIRQRVTLADLLCWF