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CsaV3_3G018090 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G018090
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationchr3:13856766..13857017
RNA-Seq ExpressionCsaV3_3G018090
SyntenyCsaV3_3G018090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]6.2e-38100Show/hide
Query:  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
        MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
Subjt:  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]6.1e-0961.43Show/hide
Query:  WRRARNETRNVIRSGGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFL
        WRRA          GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T      I K L
Subjt:  WRRARNETRNVIRSGGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFL
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein3.0e-38100Show/hide
Query:  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
        MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
Subjt:  MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH
A0A6J1D7M5 homeobox protein HAT3.1 isoform X22.9e-0961.43Show/hide
Query:  WRRARNETRNVIRSGGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFL
        WRRA          GGSGRQTVRVKA +NA + NGGPDLEDSETKPLYSLF LRT+  T      I K L
Subjt:  WRRARNETRNVIRSGGSGRQTVRVKASQNAQS-NGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTTATAGATGGAGAAGAGCCCGAAATGAGACACGCAATGTGATTAGGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAG
TAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAACACAAAGAAGAACCGAACAACAAACAACCATCATCGCCAAATTCC
TTACTCCTTTCTTCCAACCAAAACTCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTTATAGATGGAGAAGAGCCCGAAATGAGACACGCAATGTGATTAGGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTAGCCAAAATGCACAGAG
TAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTATTCTCTCTTCCCGCTGAGAACACAAAGAAGAACCGAACAACAAACAACCATCATCGCCAAATTCC
TTACTCCTTTCTTCCAACCAAAACTCCATTAA
Protein sequenceShow/hide protein sequence
MGFYRWRRARNETRNVIRSGGSGRQTVRVKASQNAQSNGGPDLEDSETKPLYSLFPLRTQRRTEQQTTIIAKFLTPFFQPKLH