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CsaV3_3G018160 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G018160
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionLYR motif-containing protein At3g19508
Genome locationchr3:13920478..13921634
RNA-Seq ExpressionCsaV3_3G018160
SyntenyCsaV3_3G018160
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]2.5e-39100Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
        MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]4.0e-3796.3Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALRVYGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
XP_015892821.1 LYR motif-containing protein At3g19508 [Ziziphus jujuba]5.4e-3486.42Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALR+YGE+LRLVR+LPKDTRPYYAKY RENFVNYREVDA D+ +LEELFHRAYNHS+WVLNKYSVD SAADKLKE+CY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]5.4e-3490Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEIC
XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]7.5e-3692.59Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALR+YGEVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELFHRAY HSLWVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein1.2e-39100Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
        MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG
A0A1S3C3W4 LYR motif-containing protein At3g195081.9e-3796.3Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALRVYGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
A0A5A7T6G8 LYR motif-containing protein1.9e-3796.3Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALRVYGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
A0A6J1FPX9 LYR motif-containing protein At3g195082.6e-3490Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEIC
A0A6P4A9N6 LYR motif-containing protein At3g195082.6e-3486.42Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        MEKALR+YGE+LRLVR+LPKDTRPYYAKY RENFVNYREVDA D+ +LEELFHRAYNHS+WVLNKYSVD SAADKLKE+CY
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868639.6e-1050Show/hide
Query:  RVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNK
        + Y EVL+LV++LP  +R YYA+Y RENFV Y EV  +D +S+  L  R ++H+ WVL K
Subjt:  RVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNK
Q1G3M2 LYR motif-containing protein At3g195087.1e-2976.54Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        M+K LRVYG V+RLVR LP D+RPYYAKY RENFVNYREVD Q   SL+ELF RAYNHSLWVL KYS+D SAA KLKEIC+
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein5.0e-3076.54Show/hide
Query:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY
        M+K LRVYG V+RLVR LP D+RPYYAKY RENFVNYREVD Q   SL+ELF RAYNHSLWVL KYS+D SAA KLKEIC+
Subjt:  MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCGCTGAGAGTATACGGAGAAGTTTTGAGGTTAGTGCGGCAGTTACCTAAGGACACAAGGCCTTACTACGCCAAATACGTTAGAGAGAATTTCGTCAACTA
TAGAGAGGTCGATGCGCAGGATGCAAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCCTTTGGGTTCTGAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAGCTGAAGGAGATCTGTTATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGCGCTGAGAGTATACGGAGAAGTTTTGAGGTTAGTGCGGCAGTTACCTAAGGACACAAGGCCTTACTACGCCAAATACGTTAGAGAGAATTTCGTCAACTA
TAGAGAGGTCGATGCGCAGGATGCAAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCCTTTGGGTTCTGAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAGCTGAAGGAGATCTGTTATGGTTAG
Protein sequenceShow/hide protein sequence
MEKALRVYGEVLRLVRQLPKDTRPYYAKYVRENFVNYREVDAQDAKSLEELFHRAYNHSLWVLNKYSVDGSAADKLKEICYG