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CsaV3_3G018320 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G018320
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationchr3:14041651..14063005
RNA-Seq ExpressionCsaV3_3G018320
SyntenyCsaV3_3G018320
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457157.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo]1.4e-7298.63Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

XP_008457158.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X2 [Cucumis melo]9.5e-7798.68Show/hide
Query:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
        MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFL
Subjt:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL

Query:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

XP_011651239.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]2.2e-73100Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

XP_016902070.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X3 [Cucumis melo]1.4e-7298.63Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

XP_031738467.1 actin-related protein 2/3 complex subunit 4 isoform X2 [Cucumis sativus]1.5e-77100Show/hide
Query:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
        MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
Subjt:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL

Query:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

TrEMBL top hitse value%identityAlignment
A0A0A0L985 Actin-related protein 2/3 complex subunit 47.1e-78100Show/hide
Query:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
        MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
Subjt:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL

Query:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

A0A0A0LHM5 Actin-related protein 2/3 complex subunit 46.9e-7398.63Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

A0A1S3C5J1 Actin-related protein 2/3 complex subunit 46.9e-7398.63Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

A0A1S3C653 Actin-related protein 2/3 complex subunit 44.6e-7798.68Show/hide
Query:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL
        MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFL
Subjt:  MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFL

Query:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  ITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

A0A1S4E268 actin-related protein 2/3 complex subunit 4 isoform X36.9e-7398.63Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 49.6e-7292.47Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        E+MQKQKLIDFI+QFMEDI+KEI +LK SVNTRGRLVATEFLKQF+
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

O96625 Actin-related protein 2/3 complex subunit 43.8e-5264.05Show/hide
Query:  MTSYVC--NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDIS
        +T+ +C  NF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+ LIETSINS+RIS+ +K++DE++ IL KKF+RFL  RAE F +LRRKP++GYDIS
Subjt:  MTSYVC--NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDIS

Query:  FLITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF
        FL+TN+H E+M K KL+DFI+QFMEDID+EIS+LK+++N RGR+VA+E+LK F
Subjt:  FLITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF

P59998 Actin-related protein 2/3 complex subunit 49.3e-5167.59Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN+H 
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF
        E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF

Q148J6 Actin-related protein 2/3 complex subunit 49.3e-5167.59Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN+H 
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF
        E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF

Q641G7 Actin-related protein 2/3 complex subunit 45.5e-5167.59Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NF  Q VERHNKPEVE+++S ELLL P++I RNE EK LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN+H 
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF
        E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding6.8e-7392.47Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
        E+MQKQKLIDFI+QFMEDI+KEI +LK SVNTRGRLVATEFLKQF+
Subjt:  EDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI

AT4G14147.2 protein binding1.5e-5977.78Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC
        NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITNYHC
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHC

Query:  EDMQKQKLIDFIVQFMEDIDKE-------ISELKMSVNTRGRLVATEFLKQFI
        E+MQKQKLIDFI+QFME   +E       +SE K      G ++ T  +KQ +
Subjt:  EDMQKQKLIDFIVQFMEDIDKE-------ISELKMSVNTRGRLVATEFLKQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGTTACGTTTGTAATTTTCCTTGTCAAGAAGTTGAAAGACACAACAAGCCGGAAGTTGAACTAAAGACCAGCTCAGAGCTTCTTCTCAATCCTATCTTAATATG
TAGAAATGAGTCAGAGAAGTGTTTGATTGAGACATCTATAAACTCTCTCCGTATCAGTCTCAAGGTTAAGCAGGCAGATGAACTAGAGAATATCCTAACTAAAAAGTTCC
TTCGATTTCTGTCAATGAGGGCAGAAGCTTTCCAGGTGTTGAGAAGAAAACCTTTACAGGGATACGACATTAGCTTTCTTATAACGAACTATCATTGTGAGGACATGCAG
AAGCAAAAACTCATTGATTTTATTGTACAGTTTATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTT
TCTAAAGCAATTCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGTTACGTTTGTAATTTTCCTTGTCAAGAAGTTGAAAGACACAACAAGCCGGAAGTTGAACTAAAGACCAGCTCAGAGCTTCTTCTCAATCCTATCTTAATATG
TAGAAATGAGTCAGAGAAGTGTTTGATTGAGACATCTATAAACTCTCTCCGTATCAGTCTCAAGGTTAAGCAGGCAGATGAACTAGAGAATATCCTAACTAAAAAGTTCC
TTCGATTTCTGTCAATGAGGGCAGAAGCTTTCCAGGTGTTGAGAAGAAAACCTTTACAGGGATACGACATTAGCTTTCTTATAACGAACTATCATTGTGAGGACATGCAG
AAGCAAAAACTCATTGATTTTATTGTACAGTTTATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTT
TCTAAAGCAATTCATATGA
Protein sequenceShow/hide protein sequence
MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHCEDMQ
KQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI