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CsaV3_3G018530 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G018530
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionAutophagy-related protein 2
Genome locationchr3:14268380..14269212
RNA-Seq ExpressionCsaV3_3G018530
SyntenyCsaV3_3G018530
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000422 - autophagy of mitochondrion (biological process)
GO:0030242 - autophagy of peroxisome (biological process)
GO:0034727 - piecemeal microautophagy of the nucleus (biological process)
GO:0044805 - late nucleophagy (biological process)
GO:0061709 - reticulophagy (biological process)
GO:0000407 - phagophore assembly site (cellular component)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0032266 - phosphatidylinositol-3-phosphate binding (molecular function)
InterPro domainsIPR026849 - Autophagy-related protein 2
IPR026886 - Autophagy-related protein 2, fungi/plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650507.1 hypothetical protein Csa_010034 [Cucumis sativus]5.9e-67100Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR

Query:  GCRAKIVVVGGNRTGLIETFGVTRQQTVGWA
        GCRAKIVVVGGNRTGLIETFGVTRQQTVGWA
Subjt:  GCRAKIVVVGGNRTGLIETFGVTRQQTVGWA

TYK13970.1 autophagy-related protein 2 isoform X2 [Cucumis melo var. makuwa]1.4e-3971.11Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN------------------------------IRIERHLVS
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN                              IRIERHLVS
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN------------------------------IRIERHLVS

Query:  FKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAK
        FKGLSK VRNG KG WLIHANPRLRSGK  G   K
Subjt:  FKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAK

XP_008456130.1 PREDICTED: autophagy-related protein 2 isoform X1 [Cucumis melo]1.2e-2466.04Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN+      V     S + + G  G  LI          +R
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR

Query:  GCRAKI
        GC  +I
Subjt:  GCRAKI

XP_011651243.1 autophagy-related protein 2 isoform X1 [Cucumis sativus]7.3e-2567.59Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN+      V   G + SV  + G  G  LI          
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK

Query:  NRGCRAKI
        +RGC  +I
Subjt:  NRGCRAKI

XP_011651244.1 autophagy-related protein 2 isoform X2 [Cucumis sativus]7.3e-2567.59Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN+      V   G + SV  + G  G  LI          
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK

Query:  NRGCRAKI
        +RGC  +I
Subjt:  NRGCRAKI

TrEMBL top hitse value%identityAlignment
A0A0A0LAA0 Autophagy-related protein 23.5e-2567.59Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN+      V   G + SV  + G  G  LI          
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSV--RNGGKGGWLIHANPRLRSGK

Query:  NRGCRAKI
        +RGC  +I
Subjt:  NRGCRAKI

A0A1S3C2I1 Autophagy-related protein 26.0e-2566.04Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN+      V     S + + G  G  LI          +R
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR

Query:  GCRAKI
        GC  +I
Subjt:  GCRAKI

A0A1S3C375 autophagy-related protein 2 isoform X26.0e-2566.04Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN+      V     S + + G  G  LI          +R
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR

Query:  GCRAKI
        GC  +I
Subjt:  GCRAKI

A0A5A7T6C1 Autophagy-related protein 23.9e-2465.09Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN+            S + + G  G  LI          +R
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNR

Query:  GCRAKI
        GC  +I
Subjt:  GCRAKI

A0A5D3CRE8 Autophagy-related protein 2 isoform X26.6e-4071.11Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN------------------------------IRIERHLVS
        MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQL+DLALN                              IRIERHLVS
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALN------------------------------IRIERHLVS

Query:  FKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAK
        FKGLSK VRNG KG WLIHANPRLRSGK  G   K
Subjt:  FKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAK

SwissProt top hitse value%identityAlignment
F8S296 Autophagy-related protein 22.1e-1970.97Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNI
        +FPWNIAK+AE  FS++AVKR+ KFLLKKKLG+ +LG+ID+DQLD+QL DGTIQL+DLA+N+
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNI

Arabidopsis top hitse value%identityAlignment
AT3G19190.1 autophagy 21.5e-2070.97Show/hide
Query:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNI
        +FPWNIAK+AE  FS++AVKR+ KFLLKKKLG+ +LG+ID+DQLD+QL DGTIQL+DLA+N+
Subjt:  MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCATGGAACATCGCAAAGACGGCGGAGGCGATGTTCTCAAAATTCGCCGTTAAAAGGCTGTGCAAATTTCTACTCAAAAAGAAATTGGGACAGTTTTTGTTGGG
AGAAATTGATATCGACCAGCTTGACGTGCAGCTTGCCGATGGCACAATTCAGCTCAACGACCTTGCCCTCAACATAAGGATTGAGAGACATTTGGTATCATTTAAGGGAT
TATCAAAATCTGTTAGGAATGGAGGCAAAGGAGGGTGGTTGATACATGCCAACCCGAGGTTGAGGAGTGGTAAAAACAGAGGGTGTAGAGCAAAAATAGTTGTTGTCGGT
GGAAATAGGACAGGATTAATTGAGACATTTGGGGTTACCCGTCAGCAAACAGTGGGATGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCATGGAACATCGCAAAGACGGCGGAGGCGATGTTCTCAAAATTCGCCGTTAAAAGGCTGTGCAAATTTCTACTCAAAAAGAAATTGGGACAGTTTTTGTTGGG
AGAAATTGATATCGACCAGCTTGACGTGCAGCTTGCCGATGGCACAATTCAGCTCAACGACCTTGCCCTCAACATAAGGATTGAGAGACATTTGGTATCATTTAAGGGAT
TATCAAAATCTGTTAGGAATGGAGGCAAAGGAGGGTGGTTGATACATGCCAACCCGAGGTTGAGGAGTGGTAAAAACAGAGGGTGTAGAGCAAAAATAGTTGTTGTCGGT
GGAAATAGGACAGGATTAATTGAGACATTTGGGGTTACCCGTCAGCAAACAGTGGGATGGGCATAA
Protein sequenceShow/hide protein sequence
MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAKIVVVG
GNRTGLIETFGVTRQQTVGWA