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CsaV3_3G032120 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G032120
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionTMV resistance protein N-like
Genome locationchr3:27740774..27741138
RNA-Seq ExpressionCsaV3_3G032120
SyntenyCsaV3_3G032120
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039303.1 TMV resistance protein N-like [Cucumis melo var. makuwa]6.0e-3470.91Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVG-SNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL
        GCK++HQIP TL TI SLTMLDI GT I  APNAIT   +LETLNCE++SRNIW SL  LVG +NGVLP+ DLN S C L DEDIPDD+ CLS LEILDL
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVG-SNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL

Query:  SKNSFVRLKK
        S NSFV+LK+
Subjt:  SKNSFVRLKK
KAA0040636.1 TMV resistance protein N-like [Cucumis melo var. makuwa]2.9e-3682.98Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGS-NGVLPITDLNQSDCNLVDEDIPDDIKCLSL
        GCKN+HQIPFTLGTIQSLTMLDI GTFI QAP+AI CLRSLETLNCER+SRNIWWSL +LVGS NG+LPI DLN SDCNLVDEDIPDDIK  ++
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGS-NGVLPITDLNQSDCNLVDEDIPDDIKCLSL
KAE8650930.1 hypothetical protein Csa_023530, partial [Cucumis sativus]5.2e-62100Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLS
        GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLS
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLS

Query:  KNSFVRLKKLIWFLWFLSFF
        KNSFVRLKKLIWFLWFLSFF
Subjt:  KNSFVRLKKLIWFLWFLSFF
KGN51226.1 hypothetical protein Csa_008699 [Cucumis sativus]3.6e-3980.37Show/hide
Query:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN
        K   + PFTLGTIQSLTMLD  GTFI QAPNAI  L+SLETLNCER+S+NIWWSL DLVGSN VLPI DLN SDCN+VDEDI DDIKCL LLEILDLSKN
Subjt:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN

Query:  SFVRLKK
        SFVRLK+
Subjt:  SFVRLKK
XP_038890297.1 TMV resistance protein N-like [Benincasa hispida]2.9e-3676.36Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERI-SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL
        GCK +HQIPFTLG IQSLTMLDI GT + QAP AIT L +LETLNCER+ SRNIW S   L G N VLP+ DLN SDCNL DEDIPDDIKCLSLLEILDL
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERI-SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL

Query:  SKNSFVRLKK
        SKNSFV+LK+
Subjt:  SKNSFVRLKK
TrEMBL top hitse value%identityAlignment
A0A0A0KU16 Uncharacterized protein1.8e-3980.37Show/hide
Query:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN
        K   + PFTLGTIQSLTMLD  GTFI QAPNAI  L+SLETLNCER+S+NIWWSL DLVGSN VLPI DLN SDCN+VDEDI DDIKCL LLEILDLSKN
Subjt:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN

Query:  SFVRLKK
        SFVRLK+
Subjt:  SFVRLKK
A0A0A0KZJ1 Uncharacterized protein5.3e-2067.42Show/hide
Query:  MLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKNSFVRLK
        MLDI GTFI QAPNA                       MDLVGSNGVLPI DLN SDCNLVDEDIPDDIKC SLLEILDLSKN FVRLK
Subjt:  MLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKNSFVRLK
A0A0A0L9U0 Uncharacterized protein5.5e-5795.76Show/hide
Query:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN
        K   + PFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN
Subjt:  KNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKN

Query:  SFVRLKKLIWFLWFLSFF
        SFVRLKKLIWFLWFLSFF
Subjt:  SFVRLKKLIWFLWFLSFF
A0A5A7T8K2 TMV resistance protein N-like2.9e-3470.91Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVG-SNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL
        GCK++HQIP TL TI SLTMLDI GT I  APNAIT   +LETLNCE++SRNIW SL  LVG +NGVLP+ DLN S C L DEDIPDD+ CLS LEILDL
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVG-SNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDL

Query:  SKNSFVRLKK
        S NSFV+LK+
Subjt:  SKNSFVRLKK
A0A5A7TF41 TMV resistance protein N-like1.4e-3682.98Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGS-NGVLPITDLNQSDCNLVDEDIPDDIKCLSL
        GCKN+HQIPFTLGTIQSLTMLDI GTFI QAP+AI CLRSLETLNCER+SRNIWWSL +LVGS NG+LPI DLN SDCNLVDEDIPDDIK  ++
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGS-NGVLPITDLNQSDCNLVDEDIPDDIKCLSL
SwissProt top hitse value%identityAlignment
Q40392 TMV resistance protein N2.9e-0730.63Show/hide
Query:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLS
        GC  +  +P  +G + +L + D   T I + P++I  L  L  L        + +    +  + G+  +  LN S CNL+D  +P++I  LS L+ LDLS
Subjt:  GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLS

Query:  KNSFVRLKKLI
        +N+F  L   I
Subjt:  KNSFVRLKKLI
Arabidopsis top hitse value%identityAlignment
AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family1.5e-0631.93Show/hide
Query:  CKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLN---CERI----------SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDI
        C  + ++   LG ++SLT L    T + + P+ I  L+ L+ L+   C+ +           ++   SL+  V  +G+  +  L+   CNL DE IP+DI
Subjt:  CKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLN---CERI----------SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDI

Query:  KCLSLLEILDLSKNSFVRL
          LS L  LDL  NSF  L
Subjt:  KCLSLLEILDLSKNSFVRL
AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family1.5e-0631.93Show/hide
Query:  CKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLN---CERI----------SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDI
        C  + ++   LG ++SLT L    T + + P+ I  L+ L+ L+   C+ +           ++   SL+  V  +G+  +  L+   CNL DE IP+DI
Subjt:  CKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLN---CERI----------SRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDI

Query:  KCLSLLEILDLSKNSFVRL
          LS L  LDL  NSF  L
Subjt:  KCLSLLEILDLSKNSFVRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTGCAAAAACGTCCACCAAATTCCTTTCACTTTGGGGACAATACAATCTCTTACCATGCTTGACATTAGAGGAACATTTATAGGTCAAGCACCAAATGCTATCACTTG
TTTAAGGAGTCTTGAAACTTTGAATTGTGAAAGGATTTCAAGAAATATTTGGTGGTCATTGATGGATTTGGTTGGGAGTAATGGTGTTTTGCCTATTACAGATTTGAATC
AAAGTGATTGCAATCTCGTGGACGAAGATATTCCTGATGATATCAAATGTCTTTCCTTATTGGAAATTCTTGACCTTAGCAAGAATTCTTTTGTAAGGCTAAAAAAATTG
ATTTGGTTTTTGTGGTTTTTAAGTTTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
GGCTGCAAAAACGTCCACCAAATTCCTTTCACTTTGGGGACAATACAATCTCTTACCATGCTTGACATTAGAGGAACATTTATAGGTCAAGCACCAAATGCTATCACTTG
TTTAAGGAGTCTTGAAACTTTGAATTGTGAAAGGATTTCAAGAAATATTTGGTGGTCATTGATGGATTTGGTTGGGAGTAATGGTGTTTTGCCTATTACAGATTTGAATC
AAAGTGATTGCAATCTCGTGGACGAAGATATTCCTGATGATATCAAATGTCTTTCCTTATTGGAAATTCTTGACCTTAGCAAGAATTCTTTTGTAAGGCTAAAAAAATTG
ATTTGGTTTTTGTGGTTTTTAAGTTTTTTCTAG
Protein sequenceShow/hide protein sequence
GCKNVHQIPFTLGTIQSLTMLDIRGTFIGQAPNAITCLRSLETLNCERISRNIWWSLMDLVGSNGVLPITDLNQSDCNLVDEDIPDDIKCLSLLEILDLSKNSFVRLKKL
IWFLWFLSFF