; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsaV3_3G044280 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G044280
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Genome locationchr3:36142371..36142654
RNA-Seq ExpressionCsaV3_3G044280
SyntenyCsaV3_3G044280
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651492.1 hypothetical protein Csa_019452 [Cucumis sativus]4.5e-0850Show/hide
Query:  FRQTYGGVRRS-LEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSK
        FR+  G V  S +EVVA+MVEE+K  IIGF  +    IA +SVQ K KLP+SF+F+SI  L+C L    A +I   FKT +K
Subjt:  FRQTYGGVRRS-LEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSK

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]3.4e-2482.05Show/hide
Query:  YGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        YGGVRRS EV AEMVEE K+MIIGFC+SSAIGIATVSV  KT+LPNSFQ LSIAVL+CF+SV FARMI+SIF+TLSKI
Subjt:  YGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1154.55Show/hide
Query:  GGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        GG   +    AEMVEE K+MI+ FC+SSAI IATVSVQ + KLP  F FLS+ +L+CF  V F +M  SI K +S+I
Subjt:  GGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]1.8e-41100Show/hide
Query:  MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
Subjt:  MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein8.7e-42100Show/hide
Query:  MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
Subjt:  MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

A0A0A0LEV1 Uncharacterized protein1.8e-0750.7Show/hide
Query:  LEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        +EVVA+MVEE+K  IIGF  +    IA +SVQ K KLP+SF+F+SI  L+C L    A +I   FKT +K+
Subjt:  LEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

A0A0A0LQB6 Uncharacterized protein1.1e-1566.25Show/hide
Query:  YGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKT--KLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        +GG  R L +VAEMVEE KEMI+  C+SSAIGIATVSVQ +T  +LP +FQFLSI VL+CF  VGFA+M   IFKT+SKI
Subjt:  YGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKT--KLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

A0A0A0LQP5 Uncharacterized protein1.6e-2772.92Show/hide
Query:  MLGQCALTVAV--WFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        MLG CAL VAV  WFRQ Y G RRSLE+VAE VEERKE IIG C+SSAIGI T SVQ KTKLPNSFQ LS+ +L+CF+SV FARMI S+F+TLS+I
Subjt:  MLGQCALTVAV--WFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

A0A0A0LSX4 Uncharacterized protein1.9e-2882.35Show/hide
Query:  AVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI
        AVWFRQ YGGVRRS EV AEMVEE K+MIIGFC+SSAIGIATVSV  KT+LPNSFQ LSIAVL+CF+SV FARMI+SIF+TLSKI
Subjt:  AVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCAGTGTGCTTTAACTGTGGCGGTTTGGTTTAGACAGACGTACGGTGGAGTGAGGCGGAGCTTGGAAGTGGTGGCGGAGATGGTGGAGGAGAGGAAAGAAAT
GATTATTGGATTCTGTTTATCGTCGGCAATAGGAATAGCGACAGTGTCTGTTCAAACCAAAACCAAGCTTCCAAATTCATTTCAGTTTCTATCCATTGCTGTTTTGATTT
GTTTTTTGTCTGTTGGATTTGCAAGGATGATCAGCTCCATTTTCAAAACACTCTCAAAGATCCT
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTCAGTGTGCTTTAACTGTGGCGGTTTGGTTTAGACAGACGTACGGTGGAGTGAGGCGGAGCTTGGAAGTGGTGGCGGAGATGGTGGAGGAGAGGAAAGAAAT
GATTATTGGATTCTGTTTATCGTCGGCAATAGGAATAGCGACAGTGTCTGTTCAAACCAAAACCAAGCTTCCAAATTCATTTCAGTTTCTATCCATTGCTGTTTTGATTT
GTTTTTTGTCTGTTGGATTTGCAAGGATGATCAGCTCCATTTTCAAAACACTCTCAAAGATCCT
Protein sequenceShow/hide protein sequence
MLGQCALTVAVWFRQTYGGVRRSLEVVAEMVEERKEMIIGFCLSSAIGIATVSVQTKTKLPNSFQFLSIAVLICFLSVGFARMISSIFKTLSKIX