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CsaV3_3G045320 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_3G045320
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Genome locationchr3:37015695..37017380
RNA-Seq ExpressionCsaV3_3G045320
SyntenyCsaV3_3G045320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]3.4e-76100Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]7.1e-7497.22Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]2.3e-5679.45Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE +K    GNNLQRS+S+PPFNTRKG  + M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]7.9e-5780.14Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE +K    GNNLQRS+S+PPFNTRKGL + M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]3.7e-6288.19Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFET EEK+  N G NLQRSAS+PPF T KGL E M+SE NLEKP+KN 
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein1.7e-76100Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A1S3CST6 uncharacterized protein LOC1035039303.5e-7497.22Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A3.5e-7497.22Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1FHE8 uncharacterized protein LOC1114457951.1e-5679.45Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE +K    GNNLQRS+S+PPFNTRKG  + M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1J1T2 uncharacterized protein LOC1114810653.8e-5780.14Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE +K    GNNLQRS+S+PPFNTRKGL + M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNI-GNNLQRSASMPPFNTRKGLRENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein4.1e-1944.78Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKN
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+   EEH++A    F  L  +E        ++S           L EN    +        
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQ-VHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKN

Query:  PWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
         WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  PWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGGAAATATTGGAAATAATCTACAGAGATCAGCGTCTA
TGCCTCCATTCAATACAAGGAAGGGTTTACGGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTA
AACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCGTTAGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGGAAATATTGGAAATAATCTACAGAGATCAGCGTCTA
TGCCTCCATTCAATACAAGGAAGGGTTTACGGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTA
AACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGTGGCGTTAGTGCTTAA
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKGNIGNNLQRSASMPPFNTRKGLRENMKSETNLEKPEKNPWWRRSNWAFL
NEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA