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CsaV3_4G007710 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_4G007710
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionGag-proteinase polyprotein
Genome locationchr4:5327587..5328201
RNA-Seq ExpressionCsaV3_4G007710
SyntenyCsaV3_4G007710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033876.1 uncharacterized protein E6C27_scaffold43059G00610 [Cucumis melo var. makuwa]5.1e-0556.36Show/hide
Query:  LQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVL
        + S GL L  +LA++L+QLLF+ESRSLSV+I DL  +I+ LTSRHVA+D++  V+
Subjt:  LQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVL

KAA0056812.1 uncharacterized protein E6C27_scaffold486G001150 [Cucumis melo var. makuwa]1.9e-0462.22Show/hide
Query:  SLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSS
        SLS SI+DLQGV+S L +R  A+D V H LHSLI D+Q++P DSS
Subjt:  SLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSS

KAA0065459.1 uncharacterized protein E6C27_scaffold17G001460 [Cucumis melo var. makuwa]1.8e-0550Show/hide
Query:  LLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDS
        L+   GL  S DL  Q++QLLF+ES+SL V + DLQG IS+LT   +AVDS+ H L + +  SQ  PS+S
Subjt:  LLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDS

KGN53530.1 hypothetical protein Csa_014465 [Cucumis sativus]7.5e-89100Show/hide
Query:  MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL
        MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL
Subjt:  MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL

Query:  FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
        FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Subjt:  FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS

TYJ98067.1 hypothetical protein E5676_scaffold369G00200 [Cucumis melo var. makuwa]8.7e-0539.13Show/hide
Query:  SHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLI
        +HV+ +P     PR     + D++     PD      GL LS+DL  +++QLL  ESR+L +S+ DLQG IS+L  RH+ +DS+ H L +L+
Subjt:  SHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLI

TrEMBL top hitse value%identityAlignment
A0A0A0KVC9 Uncharacterized protein3.6e-89100Show/hide
Query:  MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL
        MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL
Subjt:  MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDL

Query:  FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
        FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS
Subjt:  FPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS

A0A5A7SV86 Uncharacterized protein2.5e-0556.36Show/hide
Query:  LQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVL
        + S GL L  +LA++L+QLLF+ESRSLSV+I DL  +I+ LTSRHVA+D++  V+
Subjt:  LQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVL

A0A5A7ULU7 Uncharacterized protein9.4e-0562.22Show/hide
Query:  SLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSS
        SLS SI+DLQGV+S L +R  A+D V H LHSLI D+Q++P DSS
Subjt:  SLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSS

A0A5A7VJ21 Uncharacterized protein8.5e-0650Show/hide
Query:  LLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDS
        L+   GL  S DL  Q++QLLF+ES+SL V + DLQG IS+LT   +AVDS+ H L + +  SQ  PS+S
Subjt:  LLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDS

A0A5D3BG21 Uncharacterized protein4.2e-0539.13Show/hide
Query:  SHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLI
        +HV+ +P     PR     + D++     PD      GL LS+DL  +++QLL  ESR+L +S+ DLQG IS+L  RH+ +DS+ H L +L+
Subjt:  SHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHGLLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTC
GCCTCGTTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCCGCTGCTAGTTCTGCTATATCTTCTC
ATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGA
TTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAAC
TAGTCGTCATGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAGTTTGTTGACACAACTTGGTAAGTATACCTCCAGTTCTCGTATGTCTTCTGGTTTTGAAGCTGGTCACTGTGCTGATTATCCTGGTAGTTCTCAGTTTGTTTC
GCCTCGTTTGAATTCTAGTTCATCTCAGTCTTCTCTTAAGGATGGTTCTAGAGTTCCTGTTACAGAAATGAGTCTGCATCATTCCGCTGCTAGTTCTGCTATATCTTCTC
ATGTGAATAAAGTGCCTATACCCTCTAAAGGGCCTAGGGCTGGGGCTCCGTTTGCGGGAGATGATGTGATTGATGATTTGTTTCCTGATTCTCTACTTCAGTCACATGGA
TTGTTATTATCTTTCGATTTGGCAACTCAGTTGGTCCAATTGTTGTTTGAAGAATCACGTTCTTTGAGTGTTTCCATTCAAGACTTGCAAGGGGTAATCTCTAGTCTAAC
TAGTCGTCATGTTGCAGTTGATTCTGTGTTTCATGTTTTACATTCATTAATTGTTGATTCTCAAAAGCGACCTTCTGACTCTTCTAAACATGGTTCTTAG
Protein sequenceShow/hide protein sequence
MISLLTQLGKYTSSSRMSSGFEAGHCADYPGSSQFVSPRLNSSSSQSSLKDGSRVPVTEMSLHHSAASSAISSHVNKVPIPSKGPRAGAPFAGDDVIDDLFPDSLLQSHG
LLLSFDLATQLVQLLFEESRSLSVSIQDLQGVISSLTSRHVAVDSVFHVLHSLIVDSQKRPSDSSKHGS