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CsaV3_4G031860 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_4G031860
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionAuxin-responsive family protein
Genome locationchr4:22432421..22433138
RNA-Seq ExpressionCsaV3_4G031860
SyntenyCsaV3_4G031860
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-5272.39Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE-------------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALID
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+  E+ E+  E             ++VSGSNVI+YVGSTRK+Y I+SKYLSHPLLNALID
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE-------------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALID

Query:  KSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KSK  K  +DDD       DD +CI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  KSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]1.1e-6690.2Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG +NV+LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD D
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD

Query:  DDDDGHE--DDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        D+ + H+  DDE+CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DDDDGHE--DDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]1.8e-75100Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]5.5e-5374.38Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE----------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSK
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC++  E+ E++ E          +KVSGSNVI+YVGSTRK+YAI+SKYLSHPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE----------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSK

Query:  SKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
          K  ++DDDD        ECI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  SKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]2.8e-5781.82Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQIEQ--KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVD
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC  + +EEDFEQQ +Q  KVSG++VILYVGSTRK+YAI+SKYLSHPLLNALIDKSKSKKL+ 
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQIEQ--KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVD

Query:  DDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        +DDD      ++E+CI VRCEVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  DDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A0A0L464 Uncharacterized protein2.1e-3764Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVG                                    
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
                         +VLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A1S3B9J9 uncharacterized protein LOC1034876595.6e-6790.2Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG +NV+LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD D
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD

Query:  DDDDGHE--DDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        D+ + H+  DDE+CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DDDDGHE--DDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A2C9UHW2 Uncharacterized protein2.1e-3762.25Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W  +K  +D +++ E         ++VGSTRK+Y INSKYLSHPL+NALI+KSK K        
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDP-NITFDSNLEELAELYVF
                EE ++V+CEVVLFDHLLWMLEN+DP N++ DS LEELA+LYVF
Subjt:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDP-NITFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073985.6e-5174.05Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C       E++EED +QQ  +KV GSNVI+YVGSTRKKY I+SK+LSHPL+NALIDKSKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSK

Query:  KLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
                      +D E I VRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Subjt:  KLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

B9RI47 Uncharacterized protein1.1e-3863.33Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW   K+E++  Q            L+VGSTRK+Y I+SKYLSHPL+NALI KSK ++       
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
                EE ++V+CEVVLFDHLLWMLEN+DPN++FDS LEELAELYVF
Subjt:  DDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR763.0e-0942.05Show/hide
Query:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y ++S  +SHPL   L         VD     +DG       I V CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR781.9e-1140.66Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S S+ +           E D E I+V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR771.1e-1138.54Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++          D+E +LV CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family7.8e-1338.54Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++          D+E +LV CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family1.3e-1240.66Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S S+ +           E D E I+V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

AT2G36210.1 SAUR-like auxin-responsive protein family8.6e-0425.74Show/hide
Query:  EEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLE
        E D    +  K       +YVG  R K  + + YL+HPL   L+DKS  + L            + +  ++V C + +F  ++  +E+ + N  F   +E
Subjt:  EEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLE

Query:  E
        E
Subjt:  E

AT3G12955.1 SAUR-like auxin-responsive protein family6.4e-2344.97Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNV-ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDD
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D        +D  Q ++Q  + S    + VG T+K Y I+ K+L HPLLNAL++K +      ++DD+
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNV-ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDD

Query:  DDGHEDDEECIL-VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV
        +DG      CI+ V+CEVVLFDHLLWMLE  D  +    +L++ A LY+
Subjt:  DDGHEDDEECIL-VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV

AT5G20820.1 SAUR-like auxin-responsive protein family2.1e-1042.05Show/hide
Query:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y ++S  +SHPL   L         VD     +DG       I V CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTG
GGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATT
CAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAA
TGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACT
TTATGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTG
GGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATT
CAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAA
TGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACT
TTATGTTTTTTAG
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEE
CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF