CuGenDBv2

Gene ID	CsaV3_6G007790
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Coiled-coil domain-containing protein SCD2
Genome location	chr6:6244426..6247363
RNA-Seq Expression	CsaV3_6G007790
Synteny	CsaV3_6G007790
Gene Ontology terms	GO:0000911 - cytokinesis by cell plate formation (biological process)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039853.1 uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]

2.6e-132

95.82

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Query:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY
        Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKY
Subjt:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY

Query:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        FSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG  WFI
Subjt:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        LRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

TYK24648.1 coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa]

1.0e-128

94.56

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Query:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY
        Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNR KLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKY
Subjt:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY

Query:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        FSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
Subjt:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        LRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

XP_008459907.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo]

1.6e-129

96.97

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Query:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS
        MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHS
Subjt:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG

Query:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ
         DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ

XP_011656789.1 uncharacterized protein LOC101205665 [Cucumis sativus]

5.5e-143

100

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Query:  MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDD
        MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDD
Subjt:  MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDD

Query:  DGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGD
        DGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGD
Subjt:  DGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGD

Query:  GAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        GAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
Subjt:  GAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

XP_038906786.1 uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]

1.5e-124

88.89

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Query:  FGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDG
        F   Y+Y I N+MEKFFSV+QIHTHC+SSHSI LVSGPPSCGKTSLLFQFAFNLGL+GNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDD+G
Subjt:  FGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDG

Query:  IKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGA
        IKKYFSAFHLH TLPVAVVIDDFGDFFEERRCQ+KYANPRGRDLAMVRTLALC NAVSLAN  RPCQLVLSD +HGESPRLIFIYKRWVPTIFTI GDG 
Subjt:  IKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGA

Query:  GWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        GWF LRSINNCG DCCLR + AKYSIALQFLSLEEISEDS EQ
Subjt:  GWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9H1 Uncharacterized protein

5.0e-134

100

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Query:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS
        MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS
Subjt:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
        TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG

Query:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        IDCCLRTKRAKYSIALQFLSLEEISEDSREQ
Subjt:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ

A0A1S3CAT0 uncharacterized protein LOC103498887

7.5e-130

96.97

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Query:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS
        MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHS
Subjt:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG

Query:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ
         DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ

A0A5A7T9Y8 Uncharacterized protein

1.2e-132

95.82

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Query:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY
        Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKY
Subjt:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY

Query:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        FSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDG  WFI
Subjt:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        LRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

A0A5D3DM33 Coiled-coil domain-containing protein SCD2

4.9e-129

94.56

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Query:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY
        Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNR KLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKY
Subjt:  YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKY

Query:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        FSAFHLHSTLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
Subjt:  FSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
        LRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ

E5GB61 Uncharacterized protein

7.5e-130

96.97

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Query:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS
        MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHS
Subjt:  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHS

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCG

Query:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ
         DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Subjt:  IDCCLRTKRAKYSIALQFLSLEEISEDSREQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23255.1 unknown protein

2.3e-62

51.69

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Query:  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFS
        +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+
Subjt:  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFS

Query:  AFHLH--STLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        AFHLH    LP AV+IDDFGD+F +        N R RD+AMVRTLALC NA+  A +   C+LVLS+T+HG+SPR +FIYKRW+P IFTI+G G G F+
Subjt:  AFHLH--STLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS
        L S +          + AKYSIALQ+L LE+I +DS
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS

AT3G23255.2 unknown protein

7.1e-64

52.12

Show/hide

Query:  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFS
        +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+
Subjt:  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFS

Query:  AFHLH--STLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI
        AFHLH    LP AV+IDDFGD+F +        N R RD+AMVRTLALC NA+  AN+   C+LVLS+T+HG+SPR +FIYKRW+P IFTI+G G G F+
Subjt:  AFHLH--STLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFI

Query:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS
        L S +          + AKYSIALQ+L LE+I +DS
Subjt:  LRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTTTGGCTGTTGTTATATATATTCGATCAGCAACAAGATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGT
TTCAGGGCCTCCTTCCTGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACA
AACCTCCATATCTTTCTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTT
CACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGC
AATGGTTAGAACATTAGCTCTTTGTCAAAATGCCGTGAGTCTAGCAAATCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGA
TTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGG
ACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAF
HLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLR
TKRAKYSIALQFLSLEEISEDSREQ

CsaV3_6G007790 (gene) of Cucumber (Chinese Long) v3 genome