CuGenDBv2

Gene ID	CsaV3_6G044700
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	chr6:26472637..26474643
RNA-Seq Expression	CsaV3_6G044700
Synteny	CsaV3_6G044700
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143432.1 uncharacterized protein At5g65660 [Cucumis sativus]

6.3e-69

100

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

XP_008440504.1 PREDICTED: uncharacterized protein At5g65660 [Cucumis melo]

3.0e-63

93.94

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD   LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPE IEVKVEKP+KPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]

1.1e-52

84.21

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQ    H HLHL S PSKSNP   DLE NQR+SLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

9.2e-52

81.95

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L    HL L S PSKSNPT  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

XP_038881262.1 uncharacterized protein At5g65660-like [Benincasa hispida]

3.1e-55

87.97

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL D   LHL+S PSKSNPT  DLEKNQRESLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP R E IEVKVEKP KPLRIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGL6 Uncharacterized protein

3.1e-69

100

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

A0A1S3B1W3 uncharacterized protein At5g65660

1.5e-63

93.94

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI
        MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPLRD   LH QSPPSKSNPT DLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        AMPCPREPLRPE IEVKVEKP+KPLRIAVPFY
Subjt:  AMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

A0A6J1BVL2 uncharacterized protein At5g65660

5.3e-53

84.21

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQ    H HLHL S PSKSNP   DLE NQR+SLSVLMPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+VKVEKP KP RIAVPFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

A0A6J1HHX0 uncharacterized protein At5g65660-like

6.4e-51

81.2

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L    HL L S PSKSN T  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I VKVEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

A0A6J1KQE2 uncharacterized protein At5g65660-like

3.2e-50

80.45

Show/hide

Query:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF
        ME+P+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRS++Q L    HL L S PSKSN T  DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY
        IAMPCPREP RPE I+V VEKP KP RIA+PFY
Subjt:  IAMPCPREPLRPETIEVKVEKPVKPLRIAVPFY

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

1.4e-34

58.82

Show/hide

Query:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA
        +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS  + +P  D     ++S P K  P  P+++K Q  S+ VLMPGD+ PKFIA
Subjt:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA

Query:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY
        +PCP  P RPE + V V+      PVKP R  VP Y
Subjt:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

9.9e-36

58.82

Show/hide

Query:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA
        +FSPPH D SRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS  + +P  D     ++S P K  P  P+++K Q  S+ VLMPGD+ PKFIA
Subjt:  NFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS--SSQPLRDHRHLHLQSPPSKSNPT-PDLEKNQRESLSVLMPGDSIPKFIA

Query:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY
        +PCP  P RPE + V V+      PVKP R  VP Y
Subjt:  MPCPREPLRPETIEVKVE-----KPVKPLRIAVPFY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGAGTCCCAATTTCTCTCCCCCTCACTCCGACCCATCCCGACCCTCCTTAGGCTTTCCCCTCGGCACTGCTCTTCTCCTTCTCGTTATCTTCACCTTGAGCGGTAT
CTTCTCCTGTTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGTTCCTCTTCTCAACCCTTACGCGATCATCGCCATCTTCACCTGCAATCACCTCCCTCCAAATCCA
ACCCTACTCCGGATTTGGAGAAGAACCAGAGAGAAAGCTTGTCGGTGTTGATGCCAGGGGATTCCATTCCGAAGTTTATTGCGATGCCTTGTCCTAGGGAACCGTTGCGG
CCGGAGACGATTGAGGTGAAAGTGGAGAAGCCGGTGAAGCCGCTGCGAATTGCGGTTCCTTTCTATTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRDHRHLHLQSPPSKSNPTPDLEKNQRESLSVLMPGDSIPKFIAMPCPREPLR
PETIEVKVEKPVKPLRIAVPFY

CsaV3_6G044700 (gene) of Cucumber (Chinese Long) v3 genome