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CsaV3_6G052000 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_6G052000
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Genome locationchr6:30270559..30271563
RNA-Seq ExpressionCsaV3_6G052000
SyntenyCsaV3_6G052000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647753.1 hypothetical protein Csa_004390, partial [Cucumis sativus]1.1e-83100Show/hide
Query:  VTFKLRKAVLITVDVATACSHSINDFFPLFYLNYQKQLNQKTKLILLDQPLHSREMWAVGDRDPEKSQQKWNSKRSFFQPVGETAQDSNCKLCGKNTTLF
        VTFKLRKAVLITVDVATACSHSINDFFPLFYLNYQKQLNQKTKLILLDQPLHSREMWAVGDRDPEKSQQKWNSKRSFFQPVGETAQDSNCKLCGKNTTLF
Subjt:  VTFKLRKAVLITVDVATACSHSINDFFPLFYLNYQKQLNQKTKLILLDQPLHSREMWAVGDRDPEKSQQKWNSKRSFFQPVGETAQDSNCKLCGKNTTLF

Query:  VFLILNPRSKRKKKYKLASATKITKEIHDGSNNSEYSSVIAQCKTGYQKEPTKQVIRI
        VFLILNPRSKRKKKYKLASATKITKEIHDGSNNSEYSSVIAQCKTGYQKEPTKQVIRI
Subjt:  VFLILNPRSKRKKKYKLASATKITKEIHDGSNNSEYSSVIAQCKTGYQKEPTKQVIRI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAACATTTAAGCTACGTAAAGCCGTACTTATAACAGTCGATGTCGCAACAGCATGTAGTCATAGCATTAATGATTTTTTCCCCCTTTTTTATTTGAATTACCAAAAACA
ATTGAATCAAAAGACAAAGTTGATCCTATTGGACCAACCACTTCATTCAAGAGAGATGTGGGCAGTAGGTGACAGGGACCCAGAAAAGAGCCAACAAAAATGGAACAGCA
AAAGATCTTTTTTCCAGCCTGTAGGAGAAACAGCACAAGATTCAAACTGCAAACTTTGTGGCAAAAATACCACCCTTTTTGTGTTCCTAATACTCAACCCCAGAAGCAAA
AGGAAAAAGAAATATAAGCTGGCATCCGCAACCAAAATTACAAAAGAAATACATGATGGATCCAACAACTCTGAATATTCATCTGTGATAGCACAATGCAAAACAGGATA
TCAGAAAGAACCCACAAAGCAAGTGATAAGAATCTGA
mRNA sequenceShow/hide mRNA sequence
GTAACATTTAAGCTACGTAAAGCCGTACTTATAACAGTCGATGTCGCAACAGCATGTAGTCATAGCATTAATGATTTTTTCCCCCTTTTTTATTTGAATTACCAAAAACA
ATTGAATCAAAAGACAAAGTTGATCCTATTGGACCAACCACTTCATTCAAGAGAGATGTGGGCAGTAGGTGACAGGGACCCAGAAAAGAGCCAACAAAAATGGAACAGCA
AAAGATCTTTTTTCCAGCCTGTAGGAGAAACAGCACAAGATTCAAACTGCAAACTTTGTGGCAAAAATACCACCCTTTTTGTGTTCCTAATACTCAACCCCAGAAGCAAA
AGGAAAAAGAAATATAAGCTGGCATCCGCAACCAAAATTACAAAAGAAATACATGATGGATCCAACAACTCTGAATATTCATCTGTGATAGCACAATGCAAAACAGGATA
TCAGAAAGAACCCACAAAGCAAGTGATAAGAATCTGA
Protein sequenceShow/hide protein sequence
VTFKLRKAVLITVDVATACSHSINDFFPLFYLNYQKQLNQKTKLILLDQPLHSREMWAVGDRDPEKSQQKWNSKRSFFQPVGETAQDSNCKLCGKNTTLFVFLILNPRSK
RKKKYKLASATKITKEIHDGSNNSEYSSVIAQCKTGYQKEPTKQVIRI