; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsaV3_7G007700 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_7G007700
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description16S rRNA (uracil(1498)-N(3))-methyltransferase
Genome locationchr7:4798189..4801084
RNA-Seq ExpressionCsaV3_7G007700
SyntenyCsaV3_7G007700
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR006700 - Ribosomal RNA small subunit methyltransferase E
IPR015947 - PUA-like superfamily
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031377.1 ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]1.7e-15193.92Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ      GDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATKQCQRLHQMNLNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

TYK06829.1 ribosomal RNA small subunit methyltransferase E [Cucumis melo var. makuwa]1.5e-15090.29Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-------------VLPSYKGDVIRLEGDEVWHMTKVLRLKTD
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ             V+    GDVIRLEGDEVWHMTKVLRLKT+
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-------------VLPSYKGDVIRLEGDEVWHMTKVLRLKTD

Query:  DRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATK
        DRVELFNGNGGLVEGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATK
Subjt:  DRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATK

Query:  QCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML
        QCQRLHQMNLNSPLKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLML
Subjt:  QCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML

Query:  WSDSKSSNC
        WSDSK SNC
Subjt:  WSDSKSSNC

XP_004136932.2 uncharacterized protein LOC101213733 isoform X1 [Cucumis sativus]1.1e-164100Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

XP_008455052.1 PREDICTED: ribosomal RNA small subunit methyltransferase E [Cucumis melo]1.1e-15695.61Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPS+KGDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATKQCQRLHQMNLNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

XP_038877548.1 ribosomal RNA small subunit methyltransferase E isoform X1 [Benincasa hispida]1.6e-15293.58Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSC SSQMR IGAFRP+LT+LLN   FRSF+VRALSSSSL SSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKNIRVNGL+ILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASS+TPLLTERCPTISDNRV RFERI LAATKQCQRLHQM+LNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLL  INETKLSFVAVAEATPLVSALAST+IESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSS+C
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

TrEMBL top hitse value%identityAlignment
A0A1S3BZZ7 16S rRNA (uracil(1498)-N(3))-methyltransferase5.1e-15795.61Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPS+KGDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATKQCQRLHQMNLNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

A0A5A7SPG3 16S rRNA (uracil(1498)-N(3))-methyltransferase8.5e-15293.92Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ      GDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATKQCQRLHQMNLNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC
        LKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK SNC
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC

A0A5D3C8Z9 16S rRNA (uracil(1498)-N(3))-methyltransferase7.2e-15190.29Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-------------VLPSYKGDVIRLEGDEVWHMTKVLRLKTD
        MFHSCC SQMRTIGAFRPQLTQLL PS  RSFKVRALSSSSLPSSNQSRGGLPRFFSQ             V+    GDVIRLEGDEVWHMTKVLRLKT+
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQ-------------VLPSYKGDVIRLEGDEVWHMTKVLRLKTD

Query:  DRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATK
        DRVELFNGNGGLVEGSIKN+RVNGL+ILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRV RFERI LAATK
Subjt:  DRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATK

Query:  QCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML
        QCQRLHQMNLNSPLKIDGLLP INETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEV+MMKEAGAIAVGLGPYRLRVETATVAILSTLML
Subjt:  QCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML

Query:  WSDSKSSNC
        WSDSK SNC
Subjt:  WSDSKSSNC

A0A6J1GL34 16S rRNA (uracil(1498)-N(3))-methyltransferase2.5e-14891.53Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHS  S QMRTIGA RPQLT+L N SCFRSF VRALSSSSL SSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKN+RVNGL+ILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRV RFERI LAATKQCQRLHQM+LNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN
        LKIDGLL  INE+KLSFVAVAEATPLVSALAS + ESGGLLV+GPEGDFTEKEVNMMKEAGAI VGLGPYRLRVETATVAILSTLMLWSDS+SSN
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN

A0A6J1IBI6 16S rRNA (uracil(1498)-N(3))-methyltransferase1.3e-14991.53Show/hide
Query:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHSC S QMRTIGA RPQLT+L + SCFRSF+VRALSSSSL SSNQSRGGLPRFFSQVLPSYKGD+IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
Subjt:  MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP
        EGSIKNIRVNG++ILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRV RFERI LAATKQCQRLHQM+LNSP
Subjt:  EGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSP

Query:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN
        LKIDGLL  INE+KLSFVAVAEATPLVSALAS + ESGGLLV+GPEGDFTEKEVNM+KEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN
Subjt:  LKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSN

SwissProt top hitse value%identityAlignment
P44627 Ribosomal RNA small subunit methyltransferase E2.7e-1427.51Show/hide
Query:  LEGDEVWHMTKVLRLKTDDRVELFNGN-----GGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLT
        L  D   H+ +VLR+   +++ELF+G+       ++E + K+++V   EIL  E    +  + +   +       +G R ++ ++K  ELG + +TPL +
Subjt:  LEGDEVWHMTKVLRLKTDDRVELFNGN-----GGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLT

Query:  ERC-----PTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGL-LVIGPEGDFTEKEVNMMK
        ERC         D ++Q++++IA+AA +QC R     +   +K+       N+  L       A   +  L +  I +GG+ L+IG EG  + +E+   +
Subjt:  ERC-----PTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGL-LVIGPEGDFTEKEVNMMK

Query:  EAGAIAVGLGPYRLRVETATVAILSTLML
        + G   + LG   LR ETA++A +S L +
Subjt:  EAGAIAVGLGPYRLRVETATVAILSTLML

P54461 Ribosomal RNA small subunit methyltransferase E7.2e-1526.87Show/hide
Query:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPT
        + G+EV H+  V+R+   D++   + +G   +  ++++  + +  L +E       +     V+ A G  KG + +W+++K TELGA +  P    R   
Subjt:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPT

Query:  ISDNRV-----QRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEAT-----PLVSALASTKIESGGLLVI-GPEGDFTEKEVNMMK
          D++      +R+ +IA  A +Q  R     +        LL  + +     VA  E++        SA+ S+  +   LL++ GPEG  TE EV  + 
Subjt:  ISDNRV-----QRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEAT-----PLVSALASTKIESGGLLVI-GPEGDFTEKEVNMMK

Query:  EAGAIAVGLGPYRLRVETATVAILSTL
        E   +  GLGP  LR ETA +  LS +
Subjt:  EAGAIAVGLGPYRLRVETATVAILSTL

P72667 Ribosomal RNA small subunit methyltransferase E2.3e-1326.58Show/hide
Query:  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER-
        + L   ++ ++ +VLRL+  D   + +G GG+    + ++     ++L     ++ LP      V  A    KG   + ++  CTELGA++  PLLTER 
Subjt:  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER-

Query:  CPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFI--NETKLSFVAVAEATPLVSA-LASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAI
            S N+++R++RI   A +Q +R     + +PL     +  +   ET          +P++ A L  + + +  +L  GPEG +T+ E+++    G  
Subjt:  CPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFI--NETKLSFVAVAEATPLVSA-LASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAI

Query:  AVGLGPYRLRVETATVAILSTL
         V LG   LR  TA    L+ +
Subjt:  AVGLGPYRLRVETATVAILSTL

Q8K9E4 Ribosomal RNA small subunit methyltransferase E3.2e-1527.87Show/hide
Query:  RFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTE
        ++F Q+       VI L      ++ KVLR+K  D++E+FN    +    I  I  + +EI+ +++    L      H+       K  + ++ ++K  E
Subjt:  RFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTE

Query:  LGASSVTPLLTERCP-----TISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLP-----FINETKLSFVAVAEATPLVSALASTKIESGGLLVI
        LG +++TPL +E C           +   +E I +++ +QC R +   + +P   + +LP     + NETK+ F     AT  ++ L   KI    LL I
Subjt:  LGASSVTPLLTERCP-----TISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLP-----FINETKLSFVAVAEATPLVSALASTKIESGGLLVI

Query:  GPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML
        G EG F+  E+  + + G I + LGP  LR ETA +A ++ L +
Subjt:  GPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLML

Q92J59 Ribosomal RNA small subunit methyltransferase E7.2e-1527.93Show/hide
Query:  IRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER
        I L  D   H  K VLRLK +D + LFNG  G     I +I  N L +   E+ K    +ST   +  A   +K  +    +   T+LG + + PL+T  
Subjt:  IRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER

Query:  CPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKE-AGAIAV
        C   S N ++R  +  + AT+Q +RL    +   + I   L   N   L      +    +  ++S+   S   +++GPEG FT  E+ ++       ++
Subjt:  CPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKE-AGAIAV

Query:  GLGPYRLRVETATVAILSTLML
         LG   LR ETA +  ++ + L
Subjt:  GLGPYRLRVETATVAILSTLML

Arabidopsis top hitse value%identityAlignment
AT1G50000.1 methyltransferases1.3e-9663.89Show/hide
Query:  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI
        A RP  + L  PS  R      SFK  A  SSS PS     NQSRGGLPRFFS  LPS KG V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I
Subjt:  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI

Query:  KNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKID
        ++I   G++ +A E+ K +LPQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ AA KQCQRLHQM LN P+K  
Subjt:  KNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKID

Query:  GLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK
         LL  I ++KL  VA AEA PL++A+ S+  ES GLL++GPEGDFT+KEV MM EAG  AVGLGP+RLRVETAT+A+L+TL++WSDS+
Subjt:  GLLPFINETKLSFVAVAEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSK

AT1G50000.2 methyltransferases5.9e-6564.04Show/hide
Query:  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI
        A RP  + L  PS  R      SFK  A  SSS PS     NQSRGGLPRFFS  LPS KG V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I
Subjt:  AFRPQLTQLLNPSCFR------SFKVRALSSSSLPSS----NQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI

Query:  KNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKID
        ++I   G++ +A E+ K +LPQ  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER P IS+NRV R ER++ AA KQCQRLHQM LN P+K  
Subjt:  KNIRVNGLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKID

Query:  GLL
         LL
Subjt:  GLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCATAGTTGTTGTTCTTCCCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACACAGTTATTGAACCCCTCATGTTTCAGAAGCTTCAAAGTTAGAGCTCT
CTCCTCTTCATCTCTGCCCTCCTCGAACCAGTCTCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTACCTTCTTATAAGGGTGATGTTATTCGTCTAGAAGGTGATG
AAGTCTGGCATATGACTAAAGTATTGAGGTTGAAAACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAAT
GGACTTGAGATTCTGGCTATGGAAGAACCAAAATCTGTTTTACCTCAAAGCACACAATGGCATGTATTTGCAGCATGCGGTACTCTAAAGGGCGGTCGTGCTGATTGGCT
TGTTGAAAAATGTACGGAACTGGGTGCTAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATATCTGATAACCGGGTACAAAGATTTGAACGTATCGCATTGG
CAGCAACTAAACAATGTCAAAGACTGCACCAAATGAATCTGAATTCTCCCTTGAAAATTGATGGTCTTTTGCCCTTTATTAATGAAACGAAGCTATCTTTTGTAGCAGTT
GCAGAAGCGACGCCGCTTGTAAGTGCATTAGCTTCAACAAAAATAGAGTCTGGTGGGCTTTTAGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGAT
GAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTCGCAATCTTATCAACCCTCATGTTATGGTCTGACTCAAAAAGTT
CCAACTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCATAGTTGTTGTTCTTCCCAAATGCGAACTATAGGAGCATTTCGACCTCAATTGACACAGTTATTGAACCCCTCATGTTTCAGAAGCTTCAAAGTTAGAGCTCT
CTCCTCTTCATCTCTGCCCTCCTCGAACCAGTCTCGCGGTGGCCTTCCTCGCTTCTTCTCCCAAGTTCTACCTTCTTATAAGGGTGATGTTATTCGTCTAGAAGGTGATG
AAGTCTGGCATATGACTAAAGTATTGAGGTTGAAAACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACATTCGTGTCAAT
GGACTTGAGATTCTGGCTATGGAAGAACCAAAATCTGTTTTACCTCAAAGCACACAATGGCATGTATTTGCAGCATGCGGTACTCTAAAGGGCGGTCGTGCTGATTGGCT
TGTTGAAAAATGTACGGAACTGGGTGCTAGCAGTGTAACTCCTCTGCTAACAGAACGTTGCCCTACCATATCTGATAACCGGGTACAAAGATTTGAACGTATCGCATTGG
CAGCAACTAAACAATGTCAAAGACTGCACCAAATGAATCTGAATTCTCCCTTGAAAATTGATGGTCTTTTGCCCTTTATTAATGAAACGAAGCTATCTTTTGTAGCAGTT
GCAGAAGCGACGCCGCTTGTAAGTGCATTAGCTTCAACAAAAATAGAGTCTGGTGGGCTTTTAGTTATCGGACCTGAAGGAGACTTCACCGAGAAAGAGGTGAACATGAT
GAAAGAAGCTGGAGCAATTGCAGTTGGTCTTGGCCCTTATCGACTTCGTGTTGAAACTGCAACAGTCGCAATCTTATCAACCCTCATGTTATGGTCTGACTCAAAAAGTT
CCAACTGTTAA
Protein sequenceShow/hide protein sequence
MFHSCCSSQMRTIGAFRPQLTQLLNPSCFRSFKVRALSSSSLPSSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNIRVN
GLEILAMEEPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCPTISDNRVQRFERIALAATKQCQRLHQMNLNSPLKIDGLLPFINETKLSFVAV
AEATPLVSALASTKIESGGLLVIGPEGDFTEKEVNMMKEAGAIAVGLGPYRLRVETATVAILSTLMLWSDSKSSNC