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CsaV3_7G007760 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_7G007760
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationchr7:4829773..4831338
RNA-Seq ExpressionCsaV3_7G007760
SyntenyCsaV3_7G007760
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455047.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.8e-4494.9Show/hide
Query:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF
        M+SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP PPYGPAYG HPPPQ+Q NQKKEVGFVEGCLAALCCCFMLDVCF
Subjt:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF

XP_011658867.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]4.1e-49100Show/hide
Query:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
Subjt:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

XP_022952198.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]6.6e-3991.58Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY PPP YGPAYG  P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

XP_023553865.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]3.3e-3890.53Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGY PPP YGPAYG  P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

XP_038888465.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]4.1e-4191.58Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        SYYAQPPPPVGVPPPQG+PPQGYPPKD YPP GYPPQGGYPPAGYPPQG+PPPP Y PAYG HPPP HQNQKKEVGFVEGCLAALCCCFMLDVCF
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

TrEMBL top hitse value%identityAlignment
A0A0A0K2W8 Uncharacterized protein2.0e-49100Show/hide
Query:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
Subjt:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

A0A1S3BZZ2 cysteine-rich and transmembrane domain-containing protein A-like8.7e-4594.9Show/hide
Query:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF
        M+SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP PPYGPAYG HPPPQ+Q NQKKEVGFVEGCLAALCCCFMLDVCF
Subjt:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF

A0A5A7SME1 Cysteine-rich and transmembrane domain-containing protein A-like1.1e-3493.98Show/hide
Query:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEG
        M+SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP PPYGPAYG HPPPQ+Q NQKKEVGFVEG
Subjt:  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQ-NQKKEVGFVEG

A0A6J1GJV9 cysteine-rich and transmembrane domain-containing protein WIH2-like3.2e-3991.58Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY PPP YGPAYG  P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

A0A6J1I9Y5 cysteine-rich and transmembrane domain-containing protein WIH2-like2.5e-3687.37Show/hide
Query:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGY PPP YGP     P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Subjt:  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

SwissProt top hitse value%identityAlignment
P24603 Rhodopsin1.1e-0975.93Show/hide
Query:  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQ
        PPQGYPPQGYPP    PPQGYPPQ GYPP GYPPQGYPPPP   P  G  PPPQ
Subjt:  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQ

Q17094 Rhodopsin (Fragment)1.1e-0975.93Show/hide
Query:  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQ
        PPQGYPPQGYPP    PPQGYPPQ GYPP GYPPQGYPPPP   P  G  PPPQ
Subjt:  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQ

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B9.6e-1756.44Show/hide
Query:  AQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPP--PPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVC
        +Q PP VGVPP   YP +G PPKDAYPP       QGYPP  GYP  GYPPQGYPP   P  G     +PP Q Q QK   G +EGC+AALCC  +LD C
Subjt:  AQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPP--PPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVC

Query:  F
        F
Subjt:  F

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH27.1e-2872.63Show/hide
Query:  PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPP---PPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    PPPY P Y   PPPQHQ Q+   GF+EGCLAALCCC +LD CF
Subjt:  PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPP---PPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH15.3e-1555.67Show/hide
Query:  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        Y Q   PVG P     PPQGYPPKD YPP GYPP  GYPP     GYP QGYPP     P Y   P      QK+  G +EGCLAALCCC +LD CF
Subjt:  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein5.0e-2972.63Show/hide
Query:  PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPP---PPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    PPPY P Y   PPPQHQ Q+   GF+EGCLAALCCC +LD CF
Subjt:  PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPP---PPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF

AT3G49845.1 unknown protein2.3e-1849.56Show/hide
Query:  PPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPP-----------QGYPPPP-------------PYGPAYGHHPPPQHQNQKKEVGFVEGCL
        PPP G PP +GYPP GYPP   YPP  Y PQ GYPPAGYPP           QGYPPP              P  P YG  PP   +++K   GF+EGCL
Subjt:  PPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPP-----------QGYPPPP-------------PYGPAYGHHPPPQHQNQKKEVGFVEGCL

Query:  AALCCCFMLDVCF
        A LCCC +L+ CF
Subjt:  AALCCCFMLDVCF

AT4G19200.1 proline-rich family protein9.2e-0765.45Show/hide
Query:  PPPQ-GYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPP-PYGPAYGHHPP
        PP Q GYPPQGYPP+     QGYPP GGYPPAGYPP  YP  P  Y PA G +PP
Subjt:  PPPQ-GYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPP-PYGPAYGHHPP

AT4G33660.1 unknown protein1.1e-0751.32Show/hide
Query:  PPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVC
        P   YP    YP  G  PQG  PP G PPQ YPPPPP  P     PPP      ++VGF+EG LAALCCC ++D C
Subjt:  PPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVC

AT5G67600.1 unknown protein3.7e-1655.67Show/hide
Query:  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF
        Y Q   PVG P     PPQGYPPKD YPP GYPP  GYPP     GYP QGYPP     P Y   P      QK+  G +EGCLAALCCC +LD CF
Subjt:  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTTACTACGCACAGCCACCGCCTCCCGTCGGCGTTCCTCCCCCCCAGGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCCCCGCAAGGATATCC
ACCGCAGGGCGGTTATCCACCTGCCGGTTATCCTCCGCAGGGATACCCGCCTCCGCCGCCGTATGGTCCGGCGTACGGTCATCATCCTCCTCCGCAACATCAAAACCAAA
AGAAAGAAGTTGGATTCGTCGAAGGCTGTTTGGCTGCGCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTTACTACGCACAGCCACCGCCTCCCGTCGGCGTTCCTCCCCCCCAGGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCCCCGCAAGGATATCC
ACCGCAGGGCGGTTATCCACCTGCCGGTTATCCTCCGCAGGGATACCCGCCTCCGCCGCCGTATGGTCCGGCGTACGGTCATCATCCTCCTCCGCAACATCAAAACCAAA
AGAAAGAAGTTGGATTCGTCGAAGGCTGTTTGGCTGCGCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGA
Protein sequenceShow/hide protein sequence
MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAYGHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF