; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsaV3_7G008070 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_7G008070
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionGRF-type domain-containing protein
Genome locationchr7:5050198..5054570
RNA-Seq ExpressionCsaV3_7G008070
SyntenyCsaV3_7G008070
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010666 - Zinc finger, GRF-type
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645848.1 hypothetical protein Csa_017077 [Cucumis sativus]4.3e-152100Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSS
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSS
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSS

Query:  SSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        SSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
Subjt:  SSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

XP_004136952.1 uncharacterized protein LOC101219067 isoform X1 [Cucumis sativus]2.1e-42100Show/hide
Query:  MAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
Subjt:  MAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

XP_004136954.1 uncharacterized protein LOC101219463 [Cucumis sativus]3.5e-7798.64Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNT+ I
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI

XP_008455003.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo]1.5e-7290.6Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCG AAKLRMSHTEK PFRLFYNCPKE+SQQCGFFHWADE EPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N   +V+
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH

XP_022148840.1 uncharacterized protein LOC111017399 [Momordica charantia]3.7e-5572.11Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ + I
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI

TrEMBL top hitse value%identityAlignment
A0A0A0K2H6 GRF-type domain-containing protein1.7e-7798.64Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI
        LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNT+ I
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI

A0A0A0K4J1 Uncharacterized protein1.6e-6499.24Show/hide
Query:  TVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQ
        +VTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQ
Subjt:  TVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQ

Query:  SFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        SFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
Subjt:  SFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

A0A1S4E0B8 uncharacterized protein LOC1034952847.3e-7390.6Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCG AAKLRMSHTEK PFRLFYNCPKE+SQQCGFFHWADE EPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N   +V+
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH

A0A5A7SJM5 GRF-type domain-containing protein7.3e-7390.6Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MSSSEIYEESYLECYCG AAKLRMSHTEK PFRLFYNCPKE+SQQCGFFHWADE EPS+DRHANELDLIRNVCIRLTERLDEI+EEHEDEKEEWEREKAE
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH
        LTLKLSTLQTQLDDI+NR+RITNESFSMPPFESLSIRDDDD+N   +V+
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVH

A0A6J1D427 uncharacterized protein LOC1110173991.8e-5572.11Show/hide
Query:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE
        MS+SEI+EES LECYCG+ AKLR S T K PFRLFYNCPKEISQQCGFFHWADE EPS+DRH  EL+LIRNVC+ L +RLDEI EEH++EK EWER+K E
Subjt:  MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAE

Query:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI
        LTL+L TLQ+QLDDI +R+R+ NESFSMPP ++LSIRDD+ D+ + I
Subjt:  LTLKLSTLQTQLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15000.1 unknown protein2.3e-1857.73Show/hide
Query:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWR +GS +R+ +S   RS S R  ++A P+LRPPQ  LP+ R      FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GT
Subjt:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

AT2G15000.2 unknown protein8.6e-1857.29Show/hide
Query:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG
        MAWR +GS +R+ +S   RS S R  ++A P+LRPPQ  LP+ R      FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Subjt:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG

AT2G15000.3 unknown protein8.6e-1857.29Show/hide
Query:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG
        MAWR +GS +R+ +S   RS S R  ++A P+LRPPQ  LP+ R      FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Subjt:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG

AT2G15000.4 unknown protein2.3e-1857.73Show/hide
Query:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWR +GS +R+ +S   RS S R  ++A P+LRPPQ  LP+ R      FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GT
Subjt:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT

AT2G15000.5 unknown protein2.3e-1857.73Show/hide
Query:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT
        MAWR +GS +R+ +S   RS S R  ++A P+LRPPQ  LP+ R      FS+ SR+LG LGC QSFLP+YS+ A S LTSHL VN+RAFCELS+GT
Subjt:  MAWR-SGSLSRTLIS-NVRSSSSRLSSSA-PQLRPPQPPLPAPRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCATCGGAAATTTACGAGGAATCATATCTAGAATGTTACTGTGGCGTGGCGGCAAAACTAAGAATGTCTCATACAGAAAAAGGTCCATTCAGGTTATTCTACAA
CTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAACGCGAACCATCCAATGACAGACACGCCAATGAACTAGACTTGATCAGAAATGTGTGTA
TTCGTCTAACAGAAAGGTTGGATGAAATCGTAGAGGAACATGAGGATGAGAAAGAAGAGTGGGAAAGGGAAAAGGCTGAGCTAACATTGAAACTGTCAACTCTGCAAACT
CAGCTTGATGATATTCATAATAGAGTAAGGATTACCAATGAATCGTTTTCAATGCCTCCTTTTGAGTCACTTTCCATTAGAGACGACGACGACGACAACACGGTAACTAT
CGTACATCGCACAGCTCCGAATAGCGGGGAAGCTAAAACCCTCGCAAAGCCCCAACACCGCCAGCATACTCACAACATTCAGAGCGTTGAATCGGAGAAGACGATGGCTT
GGCGATCTGGATCGCTTTCTCGGACGCTAATTTCCAATGTCCGCTCTTCATCTTCCCGGTTATCTTCATCGGCTCCTCAACTCCGCCCCCCGCAGCCGCCGCTCCCCGCT
CCCCGCCGCCTGCCCGGCCGCCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAATTGGGATGCGTACAATCATTTTTGCCAATCTACAGCATGACAGCAGCTTCTTGTCT
GACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCATCGGAAATTTACGAGGAATCATATCTAGAATGTTACTGTGGCGTGGCGGCAAAACTAAGAATGTCTCATACAGAAAAAGGTCCATTCAGGTTATTCTACAA
CTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAACGCGAACCATCCAATGACAGACACGCCAATGAACTAGACTTGATCAGAAATGTGTGTA
TTCGTCTAACAGAAAGGTTGGATGAAATCGTAGAGGAACATGAGGATGAGAAAGAAGAGTGGGAAAGGGAAAAGGCTGAGCTAACATTGAAACTGTCAACTCTGCAAACT
CAGCTTGATGATATTCATAATAGAGTAAGGATTACCAATGAATCGTTTTCAATGCCTCCTTTTGAGTCACTTTCCATTAGAGACGACGACGACGACAACACGGTAACTAT
CGTACATCGCACAGCTCCGAATAGCGGGGAAGCTAAAACCCTCGCAAAGCCCCAACACCGCCAGCATACTCACAACATTCAGAGCGTTGAATCGGAGAAGACGATGGCTT
GGCGATCTGGATCGCTTTCTCGGACGCTAATTTCCAATGTCCGCTCTTCATCTTCCCGGTTATCTTCATCGGCTCCTCAACTCCGCCCCCCGCAGCCGCCGCTCCCCGCT
CCCCGCCGCCTGCCCGGCCGCCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAATTGGGATGCGTACAATCATTTTTGCCAATCTACAGCATGACAGCAGCTTCTTGTCT
GACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACTTAA
Protein sequenceShow/hide protein sequence
MSSSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRHANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAELTLKLSTLQT
QLDDIHNRVRITNESFSMPPFESLSIRDDDDDNTVTIVHRTAPNSGEAKTLAKPQHRQHTHNIQSVESEKTMAWRSGSLSRTLISNVRSSSSRLSSSAPQLRPPQPPLPA
PRRLPGRHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGT