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CsaV3_7G024100 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_7G024100
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationchr7:13111479..13120061
RNA-Seq ExpressionCsaV3_7G024100
SyntenyCsaV3_7G024100
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047452.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]3.1e-4871.53Show/hide
Query:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM
        + RNLKLKYK IV+TVFH  ACGK +N+V+FE EMRLL+S+ PGIREEL+SI F +WS AY P  +YNV+T NISESLN+ ++KARELPICSML+VLRMM
Subjt:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM

Query:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
        L RW FE RNE  YQVTDFTKT+EGI+REQI+ SRSM
Subjt:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM

KAA0065633.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.2e-4774.05Show/hide
Query:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR
        T NLKLKYK IV+ VFH+CGK +N+V+FE EM LL+S+APGIREEL+SIGF +WSRAY P  RYNVMTTNISESLN+ + KA ELPICSMLE LRMML R
Subjt:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR

Query:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS
        W FE RN+  YQVTDFTKT+EGI+REQIE S
Subjt:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS

KAE8646163.1 hypothetical protein Csa_015903 [Cucumis sativus]2.5e-106100Show/hide
Query:  MPERRRIDAAAVERLQGGGETEIFFNRHGFFLDGIENFDFGKFEINLREEFWICILKLQVITRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNA
        MPERRRIDAAAVERLQGGGETEIFFNRHGFFLDGIENFDFGKFEINLREEFWICILKLQVITRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNA
Subjt:  MPERRRIDAAAVERLQGGGETEIFFNRHGFFLDGIENFDFGKFEINLREEFWICILKLQVITRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNA

Query:  PGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
        PGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
Subjt:  PGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM

XP_008464022.1 PREDICTED: uncharacterized protein LOC103502005 [Cucumis melo]1.2e-4774.05Show/hide
Query:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR
        T NLKLKYK IV+ VFH+CGK +N+V+FE EM LL+S+APGIREEL+SIGF +WSRAY P  RYNVMTTNISESLN+ + KA ELPICSMLE LRMML R
Subjt:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR

Query:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS
        W FE RN+  YQVTDFTKT+EGI+REQIE S
Subjt:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS

XP_008465839.1 PREDICTED: uncharacterized protein LOC103503433 [Cucumis melo]3.1e-4871.53Show/hide
Query:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM
        + RNLKLKYK IV+TVFH  ACGK +N+V+FE EMRLL+S+ PGIREEL+SI F +WS AY P  +YNV+T NISESLN+ ++KARELPICSML+VLRMM
Subjt:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM

Query:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
        L RW FE RNE  YQVTDFTKT+EGI+REQI+ SRSM
Subjt:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM

TrEMBL top hitse value%identityAlignment
A0A1S3CKI4 uncharacterized protein LOC1035020055.8e-4874.05Show/hide
Query:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR
        T NLKLKYK IV+ VFH+CGK +N+V+FE EM LL+S+APGIREEL+SIGF +WSRAY P  RYNVMTTNISESLN+ + KA ELPICSMLE LRMML R
Subjt:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR

Query:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS
        W FE RN+  YQVTDFTKT+EGI+REQIE S
Subjt:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS

A0A1S3CPS6 uncharacterized protein LOC1035034331.5e-4871.53Show/hide
Query:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM
        + RNLKLKYK IV+TVFH  ACGK +N+V+FE EMRLL+S+ PGIREEL+SI F +WS AY P  +YNV+T NISESLN+ ++KARELPICSML+VLRMM
Subjt:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM

Query:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
        L RW FE RNE  YQVTDFTKT+EGI+REQI+ SRSM
Subjt:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM

A0A5A7TVG0 Protein FAR1-RELATED SEQUENCE 3-like1.5e-4871.53Show/hide
Query:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM
        + RNLKLKYK IV+TVFH  ACGK +N+V+FE EMRLL+S+ PGIREEL+SI F +WS AY P  +YNV+T NISESLN+ ++KARELPICSML+VLRMM
Subjt:  ITRNLKLKYKSIVNTVFH--ACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMM

Query:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM
        L RW FE RNE  YQVTDFTKT+EGI+REQI+ SRSM
Subjt:  LNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM

A0A5A7VBR6 Protein FAR1-RELATED SEQUENCE 3-like5.8e-4874.05Show/hide
Query:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR
        T NLKLKYK IV+ VFH+CGK +N+V+FE EM LL+S+APGIREEL+SIGF +WSRAY P  RYNVMTTNISESLN+ + KA ELPICSMLE LRMML R
Subjt:  TRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNR

Query:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS
        W FE RN+  YQVTDFTKT+EGI+REQIE S
Subjt:  WCFEHRNETAYQVTDFTKTVEGIIREQIENS

A0A5D3C7C0 Protein FAR1-RELATED SEQUENCE 3-like9.8e-4874.42Show/hide
Query:  NLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWC
        NLKLKYK IV+ VFH+CGK +N+V+FE EM LL+S+APGIREEL+SIGF +WSRAY P  RYNVMTTNISESLN+ + KA ELPICSMLE LRMML RW 
Subjt:  NLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSIGFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWC

Query:  FEHRNETAYQVTDFTKTVEGIIREQIENS
        FE RN+  YQVTDFTKT+EGI+REQIE S
Subjt:  FEHRNETAYQVTDFTKTVEGIIREQIENS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGAGGCGGCGAATCGATGCCGCAGCGGTTGAAAGGCTCCAAGGCGGTGGGGAAACTGAAATCTTCTTCAACCGCCATGGATTTTTTTTGGATGGAATTGAGAA
TTTTGATTTTGGGAAATTTGAAATTAATTTGAGAGAAGAATTTTGGATTTGCATACTTAAGCTTCAAGTTATCACAAGGAACTTGAAGTTGAAGTATAAATCAATAGTCA
ATACCGTGTTCCATGCATGTGGCAAAACTTACAATGTTGTTGATTTTGAACAAGAAATGCGTTTGTTGAAATCTAATGCACCTGGTATACGTGAGGAGTTACAATCAATT
GGATTTTTAAGGTGGTCCCGTGCCTACTTACCCCTTAGTAGATATAATGTCATGACTACCAACATATCTGAGAGTTTGAATAATGCAATTATCAAGGCTAGGGAGTTGCC
CATATGTTCAATGCTTGAGGTATTGAGAATGATGTTGAATAGGTGGTGTTTTGAACATAGAAATGAAACAGCCTATCAAGTTACAGATTTTACAAAAACTGTTGAAGGTA
TTATAAGGGAACAAATTGAAAATAGTCGATCTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAGAGGCGGCGAATCGATGCCGCAGCGGTTGAAAGGCTCCAAGGCGGTGGGGAAACTGAAATCTTCTTCAACCGCCATGGATTTTTTTTGGATGGAATTGAGAA
TTTTGATTTTGGGAAATTTGAAATTAATTTGAGAGAAGAATTTTGGATTTGCATACTTAAGCTTCAAGTTATCACAAGGAACTTGAAGTTGAAGTATAAATCAATAGTCA
ATACCGTGTTCCATGCATGTGGCAAAACTTACAATGTTGTTGATTTTGAACAAGAAATGCGTTTGTTGAAATCTAATGCACCTGGTATACGTGAGGAGTTACAATCAATT
GGATTTTTAAGGTGGTCCCGTGCCTACTTACCCCTTAGTAGATATAATGTCATGACTACCAACATATCTGAGAGTTTGAATAATGCAATTATCAAGGCTAGGGAGTTGCC
CATATGTTCAATGCTTGAGGTATTGAGAATGATGTTGAATAGGTGGTGTTTTGAACATAGAAATGAAACAGCCTATCAAGTTACAGATTTTACAAAAACTGTTGAAGGTA
TTATAAGGGAACAAATTGAAAATAGTCGATCTATGTAG
Protein sequenceShow/hide protein sequence
MPERRRIDAAAVERLQGGGETEIFFNRHGFFLDGIENFDFGKFEINLREEFWICILKLQVITRNLKLKYKSIVNTVFHACGKTYNVVDFEQEMRLLKSNAPGIREELQSI
GFLRWSRAYLPLSRYNVMTTNISESLNNAIIKARELPICSMLEVLRMMLNRWCFEHRNETAYQVTDFTKTVEGIIREQIENSRSM