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CsaV3_7G031850 (gene) of Cucumber (Chinese Long) v3 genome

Gene IDCsaV3_7G031850
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionGAG1At protein
Genome locationchr7:20219371..20224600
RNA-Seq ExpressionCsaV3_7G031850
SyntenyCsaV3_7G031850
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45214.1 hypothetical protein Csa_016217 [Cucumis sativus]8.5e-34100Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
        MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
XP_004135879.1 uncharacterized protein LOC101214375 [Cucumis sativus]1.4e-2098.18Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
XP_008461185.1 PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo]7.0e-2096.36Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAKSGGASGGAGGFRSRME+YLYSGDKKHVAAGIVIFGIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
XP_038897164.1 uncharacterized protein LOC120085312 isoform X2 [Benincasa hispida]6.6e-1887.27Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAK GGA+GGAGGFRSRMEHYLYSG+KKHVAAGIV+ GIIFGIPW LMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
XP_038897165.1 uncharacterized protein LOC120085312 isoform X3 [Benincasa hispida]6.6e-1887.27Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAK GGA+GGAGGFRSRMEHYLYSG+KKHVAAGIV+ GIIFGIPW LMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
TrEMBL top hitse value%identityAlignment
A0A0A0K8K9 Uncharacterized protein4.1e-34100Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
        MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI
A0A1S3CEK3 uncharacterized protein LOC1034998453.4e-2096.36Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAKSGGASGGAGGFRSRME+YLYSGDKKHVAAGIVIFGIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
A0A5D3CFG0 Uncharacterized protein3.4e-2096.36Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAKSGGASGGAGGFRSRME+YLYSGDKKHVAAGIVIFGIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
A0A6J1GP50 uncharacterized protein LOC1114558624.2e-1887.27Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSGEAKSGG+ GG GGFRSRMEHYLYSG+KKHVAAGIV+ GIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
A0A6J1JZC0 uncharacterized protein LOC1114888029.3e-1885.45Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        MSG+AKSGG+ GG GGFRSRMEHYLYSG+KKHVAAGIV+ GIIFGIPWALMNR S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16000.1 unknown protein3.7e-1155.17Show/hide
Query:  MSGEAKSGG---ASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        M  E K+ G   +  G GGFR++MEHY+YSG+KKHV  GI I  IIFG+PW LM + S
Subjt:  MSGEAKSGG---ASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
AT1G80890.1 unknown protein5.7e-1261.82Show/hide
Query:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS
        M  E+KS   + G GG R++MEHY+YSG+KKHV AGI I  IIFGIPW LMN+ S
Subjt:  MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGCGAGGCCAAAAGCGGGGGGGCCAGCGGCGGAGCAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTCGCTGCTGGCAT
CGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGCTTCAATAAGATATGCACAAGCTTTGTCTTGTTTGCCTTTGGCAATTGGTACTCGGTGGA
TTAGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGCGAGGCCAAAAGCGGGGGGGCCAGCGGCGGAGCAGGTGGTTTCAGATCGAGAATGGAGCACTATTTATACAGCGGCGATAAAAAGCACGTCGCTGCTGGCAT
CGTCATCTTTGGTATCATCTTCGGCATTCCTTGGGCCCTCATGAATCGAGCTTCAATAAGATATGCACAAGCTTTGTCTTGTTTGCCTTTGGCAATTGGTACTCGGTGGA
TTAGGATTTAG
Protein sequenceShow/hide protein sequence
MSGEAKSGGASGGAGGFRSRMEHYLYSGDKKHVAAGIVIFGIIFGIPWALMNRASIRYAQALSCLPLAIGTRWIRI