CuGenDBv2

Gene ID	CsaV3_7G031890
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	chr7:20240821..20244464
RNA-Seq Expression	CsaV3_7G031890
Synteny	CsaV3_7G031890
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058709.1 photosynthetic NDH subunit of subcomplex B 1 [Cucumis melo var. makuwa]

8.0e-260

96.35

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKP FLSP LISLSTSSK +IPCSKKNPWFDPFDDGEDPEMEYGSL+SDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKY+
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIA CIRGFKPVFVIPHEKERE+VEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

XP_004136098.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis sativus]

2.7e-268

100

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

XP_008461180.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis melo]

6.8e-259

96.14

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKP FLSP LISLSTSSK +IPCSKKNPWFDPFDDGEDPEMEYGSL+SDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKY+
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIA CIRGFKPVFVIP EKERE+VEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

1.2e-247

90.87

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+PP ISLSTS    SK  IP C+KKNPW DPFDDG+DP+MEYGSL++DGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPESSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSI+RKLKE++
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI

Query:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLAALINDSAG+IAT
Subjt:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCI VSSATGRLIDIDMGT+K+AIQSFEVPLALAFQ
Subjt:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

1.1e-248

91.91

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLST----SSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF PTSSF PSSPSTHFTKP FL+PP ISLST    SSK  IP SKKN W DPFDDG+DPEMEYGSL++DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLST----SSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVE+ASLGLKLRGDVRRCCCV+SGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA
        GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+A
Subjt:  GRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA

Query:  EKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATN
        EKY+KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA  +RGFKPVFVIPHEKERE+VEEEVG++ASIVFITTPGQLAALINDSAG+IATN
Subjt:  EKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATN

Query:  TAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        TAAVQLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSSATGRL DID+GT+KKAIQSFEVPLALAFQ
Subjt:  TAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6S9 Uncharacterized protein

1.3e-268

100

Show/hide

Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.3e-259

96.14

Show/hide

Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKP FLSP LISLSTSSK +IPCSKKNPWFDPFDDGEDPEMEYGSL+SDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKY+
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIA CIRGFKPVFVIP EKERE+VEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

3.9e-260

96.35

Show/hide

Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKP FLSP LISLSTSSK +IPCSKKNPWFDPFDDGEDPEMEYGSL+SDGKQEEDPRPPDNPNNPYGFLKF
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        PQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKY+
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
        KAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIA CIRGFKPVFVIPHEKERE+VEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLIDIDMGTIKKAIQSFEVPLALAFQ
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

2.9e-247

90.66

Show/hide

Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+PP ISLSTS    SK  IP C+KKNPW DPFDDG+DP+MEYGSL++DGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKE++
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI

Query:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLAALINDSAG+IAT
Subjt:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVP++EAKRCI VSSATGRLIDIDMGT+K+AIQSFEVPLALAFQ
Subjt:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

5.8e-248

90.87

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Query:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+PP ISLSTS    SK  IP C+KKNPW DPFDDG+DP+MEYGSL++DGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTS----SKFQIP-CSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVV SARGKQT+ELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPESSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSI+RKLKE++
Subjt:  KGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI

Query:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLAALINDSAG+IAT
Subjt:  AEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCI VSSATGRLIDIDMGT+K+AIQSFEVPLALAFQ
Subjt:  NTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.1e-190

72.63

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Query:  SSLP--TKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKK-NPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        SSLP   K + PF  T  F  S P        FL+      S SS   +   KK NPW DPFD GEDP+ EYGSL++DGKQ+EDPRPPDNP+NPYGFLKF
Subjt:  SSLP--TKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKK-NPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        P+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFPTIQL+KDRYPGVQ+D++T+ RGKQT+ELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  E++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSI+RK+KEV+A KYR
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
         AGA  GK+IVIHGIESDSKASMQSKGD DSLL +  WA+I K +RGFKPVFVIPHEKERE+VE+ VG++ SIVFITTPGQLAALINDSAG+IATNTAA+
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRLIDIDMGTIKKAIQSFEVPLAL
        QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GT+K A+Q FE  LAL
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRLIDIDMGTIKKAIQSFEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

2.2e-191

72.63

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Query:  SSLP--TKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKK-NPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF
        SSLP   K + PF  T  F  S P        FL+      S SS   +   KK NPW DPFD GEDP+ EYGSL++DGKQ+EDPRPPDNP+NPYGFLKF
Subjt:  SSLP--TKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKK-NPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKF

Query:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY
        P+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFPTIQL+KDRYPGVQ+D++T+ RGKQT+ELNKNVRW+NVYDPDD++PEPAEYTDM+GLLKGRYY
Subjt:  PQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYY

Query:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR
        DMVLSTKLAGLGHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  E++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSI+RK+KEV+A KYR
Subjt:  DMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYR

Query:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV
         AGA  GK+IVIHGIESDSKASMQSKGD DSLL +  WA+I K +RGFKPVFVIPHEKERE+VE+ VG++ SIVFITTPGQLAALINDSAG+IATNTAA+
Subjt:  KAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAV

Query:  QLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRLIDIDMGTIKKAIQSFEVPLAL
        QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GT+K A+Q FE  LAL
Subjt:  QLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRLIDIDMGTIKKAIQSFEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACTTCTTCTCTACCCACCAAATCCCTTCCCCCATTTTTGCCCACTTCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACAAAACCCTTTTTTCTATCCCC
ACCACTAATTTCTCTCTCAACTTCTTCAAAATTTCAAATCCCCTGTTCCAAGAAGAATCCATGGTTTGACCCATTCGACGACGGCGAGGATCCGGAGATGGAGTACGGCT
CTCTCTACTCTGACGGGAAGCAGGAAGAGGATCCTCGGCCGCCGGATAATCCGAACAATCCATATGGGTTCTTGAAATTTCCTCAGGGTTATATGGTGGAAGTCGCTTCC
CTGGGTCTCAAACTCCGGGGAGATGTGCGGCGGTGCTGCTGCGTGATCTCTGGGGGTGTTTATGAGAACCTTCTCTTCTTTCCGACGATTCAATTGCTTAAGGATCGGTA
CCCGGGTGTTCAAATCGATGTGGTGACTTCGGCGAGGGGTAAACAGACTTTTGAATTGAATAAGAATGTGCGATGGTCTAATGTGTATGATCCGGATGATTATTTTCCTG
AACCAGCAGAGTATACTGACATGGTTGGATTGCTTAAGGGCAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCTGTGTTTTTGTTTATGACA
ACTGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTATTCCTGTCCGAAACATTTAAACCAGAAAGCTCTAATCTTTCTGAGGGAGG
GTTCAACATGTATCATCAAATGGTTGACTGGTTGGGGAGGCCATTTCGTAGCGTTCCCAGGCATCCCGTTCCTCCACTTAAAGTTTCAATTGCGAGGAAATTGAAGGAGG
TTATAGCAGAAAAATATAGGAAAGCAGGTGCTGAGAAGGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCGAAAGCCTCCATGCAGTCCAAAGGTGATACTGAT
AGCTTGCTACCCATTCGAGCTTGGGCAGAAATAGCCAAGTGTATAAGGGGATTCAAGCCAGTCTTTGTCATTCCACATGAAAAGGAGCGGGAAAGTGTAGAGGAGGAGGT
CGGCAATAATGCAAGCATAGTATTTATCACGACTCCCGGACAGCTAGCTGCTCTCATTAATGACTCGGCCGGTCTAATCGCTACCAACACAGCTGCTGTCCAACTTGCCA
TTGCTCGTGAAAAACCAAGCATTGCCTTGTTTTGTTCTGAAGAGAAGGCAAAACTATTTGTTCCCAACGCTGAAGCAAAGAGATGCATCACAGTTTCGTCAGCAACAGGA
CGGCTAATCGACATCGATATGGGAACAATTAAAAAGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCCTTTCAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPFFLSPPLISLSTSSKFQIPCSKKNPWFDPFDDGEDPEMEYGSLYSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVAS
LGLKLRGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVTSARGKQTFELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFLFMT
TARDRVSYIYPDVNAAGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYRKAGAEKGKYIVIHGIESDSKASMQSKGDTD
SLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATG
RLIDIDMGTIKKAIQSFEVPLALAFQ

CsaV3_7G031890 (gene) of Cucumber (Chinese Long) v3 genome