CuGenDBv2

Gene ID	Csor.00g000630
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cold regulated protein 27, putative isoform 2
Genome location	Csor_Chr19:8579233..8581630
RNA-Seq Expression	Csor.00g000630
Synteny	Csor.00g000630
Gene Ontology terms	GO:0009409 - response to cold (biological process) GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domains	IPR044678 - Cold-regulated protein 27/28

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7011651.1 hypothetical protein SDJN02_26557 [Cucurbita argyrosperma subsp. argyrosperma]

4.02e-147

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGR---------------------------------------------------NQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSEVRQYIHSKSG                                                    NQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGR---------------------------------------------------NQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]

1.31e-143

84.23

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSE                             + + +   H  S  NQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952082.1 uncharacterized protein LOC111454842 isoform X3 [Cucurbita moschata]

1.67e-159

100

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
        KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK

Query:  RLKKASSDSSGNNRVKLGIAIDFSLENQ
        RLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022972374.1 uncharacterized protein LOC111470946 isoform X3 [Cucurbita maxima]

1.30e-147

94.3

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
        KMRRKPIMPNISSSEVRQYIHSKSGRNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITK
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK

Query:  RLKKASSDSSGNNRVKLGIAIDFSLENQ
        RLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  RLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_023553840.1 uncharacterized protein LOC111811294 isoform X3 [Cucurbita pepo subsp. pepo]

3.19e-148

94.3

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
        K+RRK IMPNISSSEVRQYIHSKSGR  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHPGELSDGTPITK
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK

Query:  RLKKASSDSSGNNRVKLGIAIDFSLENQ
        RLKKASSDSSGN+RVKLGIA D SLENQ
Subjt:  RLKKASSDSSGNNRVKLGIAIDFSLENQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X2

2.26e-134

83.4

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSE                             + + +   H  S  NQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

A0A6J1GJF7 uncharacterized protein LOC111454842 isoform X3

8.09e-160

100

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
        KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK

Query:  RLKKASSDSSGNNRVKLGIAIDFSLENQ
        RLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X1

6.35e-144

84.23

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSE                             + + +   H  S  NQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X1

4.83e-132

79.23

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSE                             + + +   H  S  NQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSE-----------------------------VRQYI---HSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1IBB9 uncharacterized protein LOC111470946 isoform X3

6.30e-148

94.3

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Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK
        KMRRKPIMPNISSSEVRQYIHSKSGRNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITK
Subjt:  KMRRKPIMPNISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITK

Query:  RLKKASSDSSGNNRVKLGIAIDFSLENQ
        RLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  RLKKASSDSSGNNRVKLGIAIDFSLENQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTAGACGCTCATACGCCGTCGTCAATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTC
TTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGAT
TATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAAT
ATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAG
TCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACT
TTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCC
ATTGATTTCTCTTTGGAGAACCAATAA

mRNA sequence

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Protein sequence

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MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPN
ISSSEVRQYIHSKSGRNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIA
IDFSLENQ

Csor.00g000630 (gene) of Silver-seed gourd (wild; sororia) v1 genome