; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g001050 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g001050
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTransmembrane protein
Genome locationCsor_Chr17:10855269..10857322
RNA-Seq ExpressionCsor.00g001050
SyntenyCsor.00g001050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576138.1 hypothetical protein SDJN03_26777, partial [Cucurbita argyrosperma subsp. sororia]1.81e-191100Show/hide
Query:  MTTYSPATFSFLDSLVGDKFSLCFIFPFVSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHSSLLVV
        MTTYSPATFSFLDSLVGDKFSLCFIFPFVSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHSSLLVV
Subjt:  MTTYSPATFSFLDSLVGDKFSLCFIFPFVSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHSSLLVV

Query:  RWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS
        RWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS
Subjt:  RWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS

Query:  STGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        STGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  STGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

KAG7014655.1 hypothetical protein SDJN02_24834, partial [Cucurbita argyrosperma subsp. argyrosperma]1.50e-14082.18Show/hide
Query:  MTTYSPATFSFLDSLVGDKFSLCFIFPF-----VSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHS
        MTTYSPATFSFLDSLVGDKFSLCFIFP       SI +  +   N  S  L+  +P P   +  FY     ++     LS HTL T  H++KLSAISPHS
Subjt:  MTTYSPATFSFLDSLVGDKFSLCFIFPF-----VSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHS

Query:  SLLVVRWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFP
        SLLVVRWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFP
Subjt:  SLLVVRWLADPHHHLRLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFP

Query:  SSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFH
        SSQMS TGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFH
Subjt:  SSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFH

XP_022953199.1 uncharacterized protein LOC111455814 [Cucurbita moschata]1.66e-8097.76Show/hide
Query:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
        M MSRPQQDP+SGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS TGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
Subjt:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY

Query:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

XP_022991383.1 uncharacterized protein LOC111488035 [Cucurbita maxima]1.66e-8097.76Show/hide
Query:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
        M MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS TGF ALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
Subjt:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY

Query:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

XP_023528198.1 uncharacterized protein LOC111791181 [Cucurbita pepo subsp. pepo]7.77e-7997.01Show/hide
Query:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
        M MSRPQQDPQSGFLHEISSLLLKILRSPPP VPFADHVLELSSAISSSSITFPSSQMS  GFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
Subjt:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY

Query:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

TrEMBL top hitse value%identityAlignment
A0A1S3CB48 uncharacterized protein LOC1034988459.40e-6582.71Show/hide
Query:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITF-PSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYM
        M+  QQDP+SG  HEISSLLLKILRSPPPPVPF+DHVLELSS ISSSS    PSSQM+  GFAALLLGISLALMLCGSVTFFLGFMLMPWILV VMIFY+
Subjt:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITF-PSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYM

Query:  VGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        VGIVSS+S+LGRS++CCFTAPTPRKDFH W+QM
Subjt:  VGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

A0A6J1DRN9 uncharacterized protein LOC111022584 isoform X31.89e-6481.82Show/hide
Query:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMV
        M RP++DPQS  LHEISSLL+KILRSPPPPVPF+DHVLELSS ISSSS   PSSQ++  G A+LLLGISLALMLCGSVTFFLGF+LMPWILV VMIFY+V
Subjt:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFYMV

Query:  GIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        GIVSS+SMLGRSILCCF+APTPRKDF+AW+QM
Subjt:  GIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

A0A6J1GNY7 uncharacterized protein LOC1114558148.04e-8197.76Show/hide
Query:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
        M MSRPQQDP+SGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS TGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
Subjt:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY

Query:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

A0A6J1JW24 uncharacterized protein LOC1114880358.04e-8197.76Show/hide
Query:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
        M MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMS TGF ALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY
Subjt:  MKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIFY

Query:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
Subjt:  MVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

A0A6J1KYV0 uncharacterized protein LOC1114976221.47e-6482.96Show/hide
Query:  MSRPQQDPQSG--FLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITF-PSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIF
        MSRPQ+DPQSG   LHE+SSLLLKILRSPPPPVPF+DHVLELSS ISSSS    PSSQM+S GFA+LLLGISLALMLCGSVTFFLGF+LMPWILVF MIF
Subjt:  MSRPQQDPQSG--FLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITF-PSSQMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVFVMIF

Query:  YMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM
        Y+VGIVSS+SMLGRS+LCC TAP PRKDF+AW+QM
Subjt:  YMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein3.9e-2649.64Show/hide
Query:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISS--SSITFPSS-----QMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVF
        M R + + QS   +++SSL+L +LRSPP P+   DH  +  + I    SS  F SS      +S +GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L  
Subjt:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISS--SSITFPSS-----QMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVF

Query:  VMIFYMVGIVSSVSMLGRSILC-CFTAPTPR-KDFHAWE
        +++FY+ GIVS++SM+GRSILC   T P+P  K+   W+
Subjt:  VMIFYMVGIVSSVSMLGRSILC-CFTAPTPR-KDFHAWE

AT1G27290.2 unknown protein3.9e-2649.64Show/hide
Query:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISS--SSITFPSS-----QMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVF
        M R + + QS   +++SSL+L +LRSPP P+   DH  +  + I    SS  F SS      +S +GFA+LLLGIS+ALMLCGSVTFF+GF+LMPW+L  
Subjt:  MSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISS--SSITFPSS-----QMSSTGFAALLLGISLALMLCGSVTFFLGFMLMPWILVF

Query:  VMIFYMVGIVSSVSMLGRSILC-CFTAPTPR-KDFHAWE
        +++FY+ GIVS++SM+GRSILC   T P+P  K+   W+
Subjt:  VMIFYMVGIVSSVSMLGRSILC-CFTAPTPR-KDFHAWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCTACTCTCCCGCCACATTTAGCTTCCTCGATTCTCTCGTTGGGGATAAGTTTTCTCTCTGTTTTATCTTCCCTTTTGTCTCCATTCAAAAAGACTTCAATCC
ACAGAAAAATCCATATTCCATTCAACTCCAACTCCGACTCCCTTCGCCACACCGTTTCACAGCCGACTTCTATGTCATTTTACTATTCATTCTTCTCGGTAATCCAACTC
TCTCCACACACACTCTTCACACTTATCCACATCTCACCAAACTCTCTGCCATTTCCCCCCATTCATCCCTTCTGGTCGTTCGTTGGTTGGCTGACCCTCATCATCATTTA
CGATTATCCATTCGCCTCGGTTCTAGCGACGACCTCCGTAGATTGTTTGTTGCGCTCTTTGCTGGGGTCTTTGTGGTTGCTTCTGAGCAGAGAATGAAGATGAGTAGGCC
TCAACAAGATCCCCAATCTGGATTTTTGCATGAGATTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCATTTGCAGATCATGTGCTGGAATTAT
CTTCCGCTATTTCGTCTTCCTCGATAACTTTTCCTTCGTCCCAGATGTCATCGACTGGATTCGCGGCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCG
GTTACTTTTTTCCTTGGCTTCATGTTGATGCCCTGGATTCTCGTTTTCGTTATGATTTTCTACATGGTTGGGATCGTTTCTAGCGTCTCTATGTTGGGACGCTCTATACT
TTGCTGTTTCACAGCTCCAACACCCCGGAAAGATTTTCATGCTTGGGAACAAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCACCTACTCTCCCGCCACATTTAGCTTCCTCGATTCTCTCGTTGGGGATAAGTTTTCTCTCTGTTTTATCTTCCCTTTTGTCTCCATTCAAAAAGACTTCAATCC
ACAGAAAAATCCATATTCCATTCAACTCCAACTCCGACTCCCTTCGCCACACCGTTTCACAGCCGACTTCTATGTCATTTTACTATTCATTCTTCTCGGTAATCCAACTC
TCTCCACACACACTCTTCACACTTATCCACATCTCACCAAACTCTCTGCCATTTCCCCCCATTCATCCCTTCTGGTCGTTCGTTGGTTGGCTGACCCTCATCATCATTTA
CGATTATCCATTCGCCTCGGTTCTAGCGACGACCTCCGTAGATTGTTTGTTGCGCTCTTTGCTGGGGTCTTTGTGGTTGCTTCTGAGCAGAGAATGAAGATGAGTAGGCC
TCAACAAGATCCCCAATCTGGATTTTTGCATGAGATTTCGTCTCTGCTTTTGAAAATTCTCCGATCGCCGCCCCCGCCGGTGCCATTTGCAGATCATGTGCTGGAATTAT
CTTCCGCTATTTCGTCTTCCTCGATAACTTTTCCTTCGTCCCAGATGTCATCGACTGGATTCGCGGCGCTGCTTTTGGGGATTTCGCTGGCTTTGATGCTCTGTGGATCG
GTTACTTTTTTCCTTGGCTTCATGTTGATGCCCTGGATTCTCGTTTTCGTTATGATTTTCTACATGGTTGGGATCGTTTCTAGCGTCTCTATGTTGGGACGCTCTATACT
TTGCTGTTTCACAGCTCCAACACCCCGGAAAGATTTTCATGCTTGGGAACAAATGTAA
Protein sequenceShow/hide protein sequence
MTTYSPATFSFLDSLVGDKFSLCFIFPFVSIQKDFNPQKNPYSIQLQLRLPSPHRFTADFYVILLFILLGNPTLSTHTLHTYPHLTKLSAISPHSSLLVVRWLADPHHHL
RLSIRLGSSDDLRRLFVALFAGVFVVASEQRMKMSRPQQDPQSGFLHEISSLLLKILRSPPPPVPFADHVLELSSAISSSSITFPSSQMSSTGFAALLLGISLALMLCGS
VTFFLGFMLMPWILVFVMIFYMVGIVSSVSMLGRSILCCFTAPTPRKDFHAWEQM