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Csor.00g001070 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g001070
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMADS-box transcription factor 8-like
Genome locationCsor_Chr17:10846937..10849565
RNA-Seq ExpressionCsor.00g001070
SyntenyCsor.00g001070
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576136.1 hypothetical protein SDJN03_26775, partial [Cucurbita argyrosperma subsp. sororia]1.89e-84100Show/hide
Query:  MINGKTLSLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVEEPNFKKLNAIDLLQLENQLQATLHKIKYQRSSISYSCVTPAKSVQTLLDTLLCCLI
        MINGKTLSLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVEEPNFKKLNAIDLLQLENQLQATLHKIKYQRSSISYSCVTPAKSVQTLLDTLLCCLI
Subjt:  MINGKTLSLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVEEPNFKKLNAIDLLQLENQLQATLHKIKYQRSSISYSCVTPAKSVQTLLDTLLCCLI

Query:  CCPTQPSEPLRPEVYMVIPPGNLSFVT
        CCPTQPSEPLRPEVYMVIPPGNLSFVT
Subjt:  CCPTQPSEPLRPEVYMVIPPGNLSFVT

TYK24685.1 MADS-box transcription factor 8-like [Cucumis melo var. makuwa]1.77e-1555.17Show/hide
Query:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL--------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+I RYQSHL+GRNE+            L+D+D KDH SDETIL        VEEPNFKKL+   ++QLENQL+ TL KIK QR
Subjt:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL--------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR

XP_008459847.1 PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]6.30e-1448Show/hide
Query:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL---------------------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+I RYQSHL+GRNE+            L+D+D KDH SDETIL                     VEEPNFKKL+   ++QLENQL+ TL KIK QR
Subjt:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL---------------------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR

XP_011656809.1 MADS-box transcription factor 8 [Cucumis sativus]4.48e-1653.26Show/hide
Query:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+I RYQSHL+GRNE+            L+DND KDH SDETILV             EEPNFKKL+   ++QLENQL++TL KIK QR
Subjt:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR

XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]1.56e-3182.5Show/hide
Query:  SLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVE-------------EPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILV              EPNFKKLNAIDLLQLENQLQATLHKIKYQR
Subjt:  SLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVE-------------EPNFKKLNAIDLLQLENQLQATLHKIKYQR

TrEMBL top hitse value%identityAlignment
A0A0A0KFD8 Uncharacterized protein1.56e-1452.94Show/hide
Query:  RYQSHLEGRNEN------------LVDNDTKDHESDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        RYQSHL+GRNE+            L+DND KDH SDETILV             EEPNFKKL+   ++QLENQL++TL KIK QR
Subjt:  RYQSHLEGRNEN------------LVDNDTKDHESDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR

A0A1S3CCC5 MADS-box transcription factor 8-like3.05e-1448Show/hide
Query:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL---------------------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+I RYQSHL+GRNE+            L+D+D KDH SDETIL                     VEEPNFKKL+   ++QLENQL+ TL KIK QR
Subjt:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL---------------------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR

A0A5D3DM40 MADS-box transcription factor 8-like8.59e-1655.17Show/hide
Query:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL--------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+I RYQSHL+GRNE+            L+D+D KDH SDETIL        VEEPNFKKL+   ++QLENQL+ TL KIK QR
Subjt:  SLSNVIKRYQSHLEGRNEN------------LVDNDTKDHESDETIL--------VEEPNFKKLNAIDLLQLENQLQATLHKIKYQR

A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like6.17e-1353.01Show/hide
Query:  SLSNVIKRYQSHLEGRNENLVDN--DTKDHE-SDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+IKRYQSH EGR+++   N  DTK+HE S+ET++V             EEP+FKKLN  D++ LENQL+A+L KIK QR
Subjt:  SLSNVIKRYQSHLEGRNENLVDN--DTKDHE-SDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR

A0A6J1KPU7 MADS-box protein 04g005320-like7.62e-1454.32Show/hide
Query:  SLSNVIKRYQSHLEGRNENLVDNDTKDHE-SDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR
        SL N+IKRYQSH EGR+E+  + DTK++E SDET++V             EEP+FKKLN  D++ LENQL+A+L KIK QR
Subjt:  SLSNVIKRYQSHLEGRNENLVDNDTKDHE-SDETILV-------------EEPNFKKLNAIDLLQLENQLQATLHKIKYQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATGGTAAAACACTGAGCCTATCGAATGTTATTAAGCGCTATCAAAGCCACCTTGAAGGGAGAAATGAAAATCTAGTTGACAATGATACGAAAGACCATGAATC
TGATGAGACAATCTTGGTTGAGGAACCAAATTTCAAGAAGCTGAATGCAATTGATTTGCTGCAATTGGAGAACCAACTTCAAGCCACACTTCACAAAATCAAATATCAAA
GATCCTCCATCAGTTACTCGTGTGTTACACCAGCAAAATCAGTGCAAACTTTGCTAGATACATTACTATGCTGTCTTATATGTTGTCCTACACAACCTAGTGAGCCCCTG
CGTCCAGAAGTGTATATGGTGATTCCCCCTGGAAACTTGAGCTTTGTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATGGTAAAACACTGAGCCTATCGAATGTTATTAAGCGCTATCAAAGCCACCTTGAAGGGAGAAATGAAAATCTAGTTGACAATGATACGAAAGACCATGAATC
TGATGAGACAATCTTGGTTGAGGAACCAAATTTCAAGAAGCTGAATGCAATTGATTTGCTGCAATTGGAGAACCAACTTCAAGCCACACTTCACAAAATCAAATATCAAA
GATCCTCCATCAGTTACTCGTGTGTTACACCAGCAAAATCAGTGCAAACTTTGCTAGATACATTACTATGCTGTCTTATATGTTGTCCTACACAACCTAGTGAGCCCCTG
CGTCCAGAAGTGTATATGGTGATTCCCCCTGGAAACTTGAGCTTTGTGACATAA
Protein sequenceShow/hide protein sequence
MINGKTLSLSNVIKRYQSHLEGRNENLVDNDTKDHESDETILVEEPNFKKLNAIDLLQLENQLQATLHKIKYQRSSISYSCVTPAKSVQTLLDTLLCCLICCPTQPSEPL
RPEVYMVIPPGNLSFVT