; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Csor.00g008920 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g008920
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionF-box protein
Genome locationCsor_Chr08:558075..560379
RNA-Seq ExpressionCsor.00g008920
SyntenyCsor.00g008920
Gene Ontology termsNA
InterPro domainsIPR044207 - F-box protein At5g39250-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592901.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]2.39e-154100Show/hide
Query:  MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFEGDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEA
        MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFEGDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEA
Subjt:  MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFEGDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEA

Query:  PEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCD
        PEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCD
Subjt:  PEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCD

Query:  AANTKDEVLWLLDLLDWK
        AANTKDEVLWLLDLLDWK
Subjt:  AANTKDEVLWLLDLLDWK

XP_022959961.1 F-box protein At5g39250 [Cucurbita moschata]7.40e-103100Show/hide
Query:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
Subjt:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

XP_023005069.1 F-box protein At5g39250-like [Cucurbita maxima]7.40e-103100Show/hide
Query:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
Subjt:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

XP_023513418.1 F-box protein At5g39250-like [Cucurbita pepo subsp. pepo]1.22e-10199.34Show/hide
Query:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVA IVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
Subjt:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

XP_038883395.1 F-box protein At5g39250 isoform X2 [Benincasa hispida]1.76e-9491.45Show/hide
Query:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY
        RLIFSEVV+GQVLQ+GMK PPPGT NV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+
Subjt:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY

Query:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

TrEMBL top hitse value%identityAlignment
A0A1S3BL55 F-box protein At5g392506.59e-9288.82Show/hide
Query:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY
        RLIFSE V+G++LQ+GMK PPPGTSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+
Subjt:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY

Query:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

A0A5A7TI25 F-box protein6.59e-9288.82Show/hide
Query:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY
        RLIFSE V+G++LQ+GMK PPPGTSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+
Subjt:  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY

Query:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  PFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

A0A6J1CT74 F-box protein At5g392502.92e-8888.08Show/hide
Query:  LIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        LIFSEVV GQVLQ+G+K PPPGTSNV+  HLEAPEFKMTL V+PRF+IP+ HTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+P
Subjt:  LIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDG++DVFGIVMDF DAAN+KDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

A0A6J1H6B9 F-box protein At5g392503.58e-103100Show/hide
Query:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
Subjt:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

A0A6J1KTX3 F-box protein At5g39250-like3.58e-103100Show/hide
Query:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
        RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP
Subjt:  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYP

Query:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Subjt:  FVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

SwissProt top hitse value%identityAlignment
Q9FL82 F-box protein At5g392502.0e-5162.58Show/hide
Query:  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY
        RL+FS ++ G  L++G++  P G SNV+  HL  P++KM +P +PRF+IP++ +VSVSVLV R DS+KVARI+N+SVFDYIDR+SYR LAF+YLD SP Y
Subjt:  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY

Query:  PFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        PF+SGIRAWISLLF+   D  +DG++DVFGI +DF D A+TK+EVLWLLD+LDWK
Subjt:  PFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

Arabidopsis top hitse value%identityAlignment
AT5G39250.1 F-box family protein1.5e-5262.58Show/hide
Query:  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY
        RL+FS ++ G  L++G++  P G SNV+  HL  P++KM +P +PRF+IP++ +VSVSVLV R DS+KVARI+N+SVFDYIDR+SYR LAF+YLD SP Y
Subjt:  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLY

Query:  PFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
        PF+SGIRAWISLLF+   D  +DG++DVFGI +DF D A+TK+EVLWLLD+LDWK
Subjt:  PFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAAATCGAGATGAGGTGACGAACGAAAAACGCATCCGGAGGAGGAGAGGCGGAATTCGGAGTAAAGTGTATTTTACTTCGTTTTCTCGGGCGTATGATCTCCT
AGGGATCCAATCCTTGCCCCTCTTGTTATACTACTTCTATTTGGAAAATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTACTGGAAGATTAATCTTCTCAGAAG
TAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAG
CCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTCGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACAT
TGATCGAACATCATACAGGACATTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATG
GAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAAATCGAGATGAGGTGACGAACGAAAAACGCATCCGGAGGAGGAGAGGCGGAATTCGGAGTAAAGTGTATTTTACTTCGTTTTCTCGGGCGTATGATCTCCT
AGGGATCCAATCCTTGCCCCTCTTGTTATACTACTTCTATTTGGAAAATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTACTGGAAGATTAATCTTCTCAGAAG
TAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAG
CCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTCGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACAT
TGATCGAACATCATACAGGACATTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATG
GAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA
Protein sequenceShow/hide protein sequence
MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFEGDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQ
PRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK