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Csor.00g009000 (gene) of Silver-seed gourd (wild; sororia) v1 genome

Gene IDCsor.00g009000
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptiontranscription factor IBH1
Genome locationCsor_Chr08:519722..520117
RNA-Seq ExpressionCsor.00g009000
SyntenyCsor.00g009000
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]3.16e-3068.87Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        + S+SS+LRLARTFLRSF+ IKS+ P    S    ELRRRSRRIK+ AYSSMAR AGP+ AWARALLFKL TRARHRTL+ RRR    S   DD VGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RL+PGG
Subjt:  RLLPGG

KAG6592893.1 hypothetical protein SDJN03_12369, partial [Cucurbita argyrosperma subsp. sororia]8.52e-83100Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGGTEWTCAPCWRKLPTTSIASPRRLRS
        RLLPGGTEWTCAPCWRKLPTTSIASPRRLRS
Subjt:  RLLPGGTEWTCAPCWRKLPTTSIASPRRLRS

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.91e-5998.11Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMAR AGPQRAWARALLFKLNTRARH TLMRRRRSTMPSAYPDDHVGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RLLPGG
Subjt:  RLLPGG

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]1.82e-3570.75Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMAR AGP+RAWARALLFKL TR RHRTLMRR+R   PS  PDD VGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RLLPGG
Subjt:  RLLPGG

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]9.35e-5795.28Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMAR AGPQR WARALLFKLNTRARHRT MRRR STMPSAYPDDHVGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RL+PGG
Subjt:  RLLPGG

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein1.61e-2359.43Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        +NS+SS L  ART              T AS    +L+R+SRRIK+AAYSSMAR AG +RAWARALLF+L+TR RH+TLMRR+R   PS   DD VGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RLLPGG
Subjt:  RLLPGG

A0A1S3CLD3 transcription factor IBH18.81e-3670.75Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMAR AGP+RAWARALLFKL TR RHRTLMRR+R   PS  PDD VGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RLLPGG
Subjt:  RLLPGG

A0A2N9I4P0 Uncharacterized protein1.70e-1747.83Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRST---MPSAYPDDHVG
        +N++S  ++ AR F+R+ S++K    T  +S S  E+R+RS+RIKIAAYSSMA A G ++AW+RA+LFKL  RARH+ +M RRRS       A  +D  G
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRST---MPSAYPDDHVG

Query:  ------KLRRLLPGG
              KLR+L+PGG
Subjt:  ------KLRRLLPGG

A0A5D3BPL2 Transcription factor IBH18.81e-3670.75Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMAR AGP+RAWARALLFKL TR RHRTLMRR+R   PS  PDD VGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RLLPGG
Subjt:  RLLPGG

A0A6J1KS83 transcription factor IBH14.53e-5795.28Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR
        MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMAR AGPQR WARALLFKLNTRARHRT MRRR STMPSAYPDDHVGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLR

Query:  RLLPGG
        RL+PGG
Subjt:  RLLPGG

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH11.2e-0644.12Show/hide
Query:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRR-----RRSTMPSAYPDDHVGKLRRLLP
        LA  FLR+ SRI    P T          RR+R I+ AAYSSMARAA P+RAW+RALL +   R R RTLMRR     RR  + +  P     +  R++ 
Subjt:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRR-----RRSTMPSAYPDDHVGKLRRLLP

Query:  GG
         G
Subjt:  GG

Q7XR02 Transcription factor IBH17.1e-0744.12Show/hide
Query:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRR-----RRSTMPSAYPDDHVGKLRRLLP
        LA  FLR+ SRI    P T          RR+R I+ AAYSSMARAA P+RAW+RALL ++  R R RTLMRR     RR  + +  P     +  R++ 
Subjt:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRR-----RRSTMPSAYPDDHVGKLRRLLP

Query:  GG
         G
Subjt:  GG

Q9SKX1 Transcription factor IBH19.5e-0434.95Show/hide
Query:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAA-GPQRAWARALLFKLN---------TRARHRTLMRRRRSTMPSAYPDDHVGKLRRLL
        FL+S S ++ + P     +  +    R R+IK AAY SMARAA G  R W+RALL + +         +R + +   +RRRS   +   ++   +LR L+
Subjt:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAA-GPQRAWARALLFKLN---------TRARHRTLMRRRRSTMPSAYPDDHVGKLRRLL

Query:  PGG
        PGG
Subjt:  PGG

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 16.8e-0534.95Show/hide
Query:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAA-GPQRAWARALLFKLN---------TRARHRTLMRRRRSTMPSAYPDDHVGKLRRLL
        FL+S S ++ + P     +  +    R R+IK AAY SMARAA G  R W+RALL + +         +R + +   +RRRS   +   ++   +LR L+
Subjt:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAA-GPQRAWARALLFKLN---------TRARHRTLMRRRRSTMPSAYPDDHVGKLRRLL

Query:  PGG
        PGG
Subjt:  PGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCTCATCTTCTTCCCTCCGCCTAGCTCGAACCTTCCTCCGATCCTTCTCCAGGATCAAATCCCGAAGACCCACCACCGCTGCCTCTCGGTCCGCTTTCGAGCT
TAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCACGCGCGGCTGGGCCACAACGAGCATGGGCTAGAGCCCTCCTCTTCAAGCTCAATACTCGAG
CTAGACATAGGACTTTGATGAGACGCCGCCGTTCAACGATGCCCTCGGCCTACCCCGACGACCATGTCGGGAAGCTCCGCCGCTTACTTCCGGGCGGGACGGAATGGACG
TGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCTCATCTTCTTCCCTCCGCCTAGCTCGAACCTTCCTCCGATCCTTCTCCAGGATCAAATCCCGAAGACCCACCACCGCTGCCTCTCGGTCCGCTTTCGAGCT
TAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCACGCGCGGCTGGGCCACAACGAGCATGGGCTAGAGCCCTCCTCTTCAAGCTCAATACTCGAG
CTAGACATAGGACTTTGATGAGACGCCGCCGTTCAACGATGCCCTCGGCCTACCCCGACGACCATGTCGGGAAGCTCCGCCGCTTACTTCCGGGCGGGACGGAATGGACG
TGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGA
Protein sequenceShow/hide protein sequence
MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARAAGPQRAWARALLFKLNTRARHRTLMRRRRSTMPSAYPDDHVGKLRRLLPGGTEWT
CAPCWRKLPTTSIASPRRLRS